RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 SLC25A27O95847 323 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 HOXD10P28358 340 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 STAT3P40763 770 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 METAP2P50579 478 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRPF3-207ENST00000496202 RCAN1P53805 252 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 OAZ1P54368 228 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 SNAP25P60880 206 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 TMEM132BQ14DG7 1078 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
PRPF3-207ENST00000496202 NCAPG2Q86XI2 1143 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 STAG2Q8N3U4 1231 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 COA7Q96BR5 231 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 TBC1D32Q96NH3 1257 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 LZTS2Q9BRK4 669 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 AGXT2Q9BYV1 514 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 CPVLQ9H3G5 476 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 EFCC1Q9HA90 598 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
PRPF3-207ENST00000496202 VAT1LQ9HCJ6 419 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 RBM28Q9NW13 759 aaKnown RBP11.24□□□□□ -0.61
PRPF3-207ENST00000496202 PNMA2Q9UL42 364 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 BRPF3Q9ULD4 1205 aa11.24□□□□□ -0.61
PRPF3-207ENST00000496202 PLXNB2O15031 1838 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 CCDC196A0A1B0GTZ2 297 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 GNRH1P01148 92 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-207ENST00000496202 RABEP1Q15276 862 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 CDC37Q16543 378 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-207ENST00000496202 NOL8Q76FK4 1167 aaKnown RBP11.23□□□□□ -0.61
PRPF3-207ENST00000496202 RIOX2Q8IUF8 465 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 ADGRF4Q8IZF3 695 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 FANCBQ8NB91 859 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 SHCBP1Q8NEM2 672 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 MOV10L1Q9BXT6 1211 aaKnown RBP11.23□□□□□ -0.61
PRPF3-207ENST00000496202 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 PORCNQ9H237 461 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
PRPF3-207ENST00000496202 MROH8Q9H579 483 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 HOMER2Q9NSB8 354 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 SEC63Q9UGP8 760 aaKnown RBP11.23□□□□□ -0.61
PRPF3-207ENST00000496202 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-207ENST00000496202 CCPG1Q9ULG6 757 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 TRIM17Q9Y577 477 aa11.23□□□□□ -0.61
PRPF3-207ENST00000496202 ATP2A1O14983 1001 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 PLEKHA8P1O95397 391 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 ICAM1P05362 532 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 ALAS1P13196 640 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 ERCC3P19447 782 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 AK2P54819 239 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 TRAF1Q13077 416 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 PPP2R5BQ15173 497 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 Q3C1V9 767 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 TKFCQ3LXA3 575 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 POTEEQ6S8J3 1075 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 PLEKHH3Q7Z736 793 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 CTU1Q7Z7A3 348 aaKnown RBP11.22□□□□□ -0.61
PRPF3-207ENST00000496202 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 PIBF1Q8WXW3 757 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 RRP36Q96EU6 259 aaKnown RBP11.22□□□□□ -0.61
PRPF3-207ENST00000496202 ZNF274Q96GC6 653 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-207ENST00000496202 SPZ1Q9BXG8 430 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 FBXO40Q9UH90 709 aa11.22□□□□□ -0.61
PRPF3-207ENST00000496202 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.61
PRPF3-207ENST00000496202 CPLX1O14810 134 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 ST18O60284 1047 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 CCT2P78371 535 aaKnown RBP11.21□□□□□ -0.61
PRPF3-207ENST00000496202 STK3Q13188 491 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 KCTD2Q14681 263 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 QRICH1Q2TAL8 776 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 USH1GQ495M9 461 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 CPLX2Q6PUV4 134 aaKnown RBP11.21□□□□□ -0.61
PRPF3-207ENST00000496202 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 GPR142Q7Z601 462 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 FBXO11Q86XK2 927 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 CCDC82Q8N4S0 544 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 CHST13Q8NET6 341 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 SOCS4Q8WXH5 440 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 AGBL1Q96MI9 1066 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
PRPF3-207ENST00000496202 ALDH8A1Q9H2A2 487 aaPredicted RBP11.21□□□□□ -0.61
PRPF3-207ENST00000496202 SLKQ9H2G2 1235 aaPredicted RBP11.21□□□□□ -0.61
PRPF3-207ENST00000496202 ACAD9Q9H845 621 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
PRPF3-207ENST00000496202 NID2Q14112 1375 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 SLC15A5A6NIM6 579 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 ZBTB5O15062 677 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 FCER1AP12319 257 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 PDIA3P30101 505 aaKnown RBP11.2□□□□□ -0.62
PRPF3-207ENST00000496202 PRMT2P55345 433 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 EVCP57679 992 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 AKAP17AQ02040 695 aaKnown RBP11.2□□□□□ -0.62
PRPF3-207ENST00000496202 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms