RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 FBXO11Q86XK2 927 aa27.91■■■□□ 2.06
PPP1R3F-205ENST00000495799 PGBD1Q96JS3 809 aa27.91■■■□□ 2.06
PPP1R3F-205ENST00000495799 PCDHA6Q9UN73 950 aa27.91■■■□□ 2.06
PPP1R3F-205ENST00000495799 PCDHA8Q9Y5H6 950 aa27.91■■■□□ 2.06
PPP1R3F-205ENST00000495799 MORC2Q9Y6X9 1032 aaPredicted RBP27.91■■■□□ 2.06
PPP1R3F-205ENST00000495799 POTECB2RU33 542 aa27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 MRPL12P52815 198 aaKnown RBP27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 BACE1P56817 501 aa27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 MTMR2Q13614 643 aa27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 REXO1Q8N1G1 1221 aaKnown RBP27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 CUL5Q93034 780 aa27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 RIC8AQ9NPQ8 531 aa27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.9■■■□□ 2.06
PPP1R3F-205ENST00000495799 PPP1R11O60927 126 aaPredicted RBP27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 SPP2Q13103 211 aa27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 PTPAQ15257 358 aa27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 ADALQ6DHV7 355 aa27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 TEX2Q8IWB9 1127 aa27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 PCDHA1Q9Y5I3 950 aa27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 PHIPQ8WWQ0 1821 aa27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 PAPPA2Q9BXP8 1791 aa27.89■■■□□ 2.06
PPP1R3F-205ENST00000495799 PRKG1Q13976 671 aa27.88■■■□□ 2.05
PPP1R3F-205ENST00000495799 TTC38Q5R3I4 469 aa27.88■■■□□ 2.05
PPP1R3F-205ENST00000495799 GZF1Q9H116 711 aaPredicted RBP27.88■■■□□ 2.05
PPP1R3F-205ENST00000495799 PCDHA7Q9UN72 937 aa27.88■■■□□ 2.05
PPP1R3F-205ENST00000495799 CLEC11AQ9Y240 323 aa27.88■■■□□ 2.05
PPP1R3F-205ENST00000495799 ZHX2Q9Y6X8 837 aa27.88■■■□□ 2.05
PPP1R3F-205ENST00000495799 A0A1W2PQ27 194 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 A0A1W2PQ64 194 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 A0A1W2PQD8 194 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 NONOQ15233 471 aaKnown RBP eCLIP27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 EARS2Q5JPH6 523 aaKnown RBP27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 MCTP2Q6DN12 878 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 C12orf42Q96LP6 360 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 RANBP17Q9H2T7 1088 aaKnown RBP27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 FZD1Q9UP38 647 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 ATP2B1P20020 1258 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 TPRNQ4KMQ1 711 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 KIFC2Q96AC6 838 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 PCDHB6Q9Y5E3 794 aa27.87■■■□□ 2.05
PPP1R3F-205ENST00000495799 OTOFQ9HC10 1997 aa27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 FAM205CA6NFA0 338 aa27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 CCDC183Q5T5S1 534 aa27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 CCDC73Q6ZRK6 1079 aa27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 ARMC9Q7Z3E5 817 aa27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 PRPF38AQ8NAV1 312 aaKnown RBP27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 RBM46Q8TBY0 533 aaKnown RBP27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 SLF1Q9BQI6 1058 aa27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 PSTPIP2Q9H939 334 aa27.86■■■□□ 2.05
PPP1R3F-205ENST00000495799 VGLL4Q14135 290 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 MAP3K11Q16584 847 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 ANKRD13AQ8IZ07 590 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 RASGRP4Q8TDF6 673 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 EMILIN3Q9NT22 766 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 TMOD4Q9NZQ9 345 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 PNMA2Q9UL42 364 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 SNCAIPQ9Y6H5 919 aa27.85■■■□□ 2.05
PPP1R3F-205ENST00000495799 CUTAO60888 179 aa27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 FDX1P10109 184 aa27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 VCAM1P19320 739 aa27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 TTLL12Q14166 644 aaPredicted RBP27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 CCAR1Q8IX12 1150 aaKnown RBP27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 KRI1Q8N9T8 703 aaKnown RBP27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 MRPS27Q92552 414 aaKnown RBP27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 TANGO6Q9C0B7 1094 aa27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 DDX19AQ9NUU7 478 aaKnown RBP27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 TMEM63CQ9P1W3 806 aa27.84■■■□□ 2.05
PPP1R3F-205ENST00000495799 LETM1O95202 739 aaPredicted RBP27.83■■■□□ 2.05
PPP1R3F-205ENST00000495799 MARCKSP29966 332 aaPredicted RBP27.83■■■□□ 2.05
PPP1R3F-205ENST00000495799 ORC2Q13416 577 aaPredicted RBP27.83■■■□□ 2.05
PPP1R3F-205ENST00000495799 AFG3L2Q9Y4W6 797 aa27.83■■■□□ 2.05
PPP1R3F-205ENST00000495799 ADAMTS3O15072 1205 aa27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 GSE1Q14687 1217 aa27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 NOM1Q5C9Z4 860 aaKnown RBP27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 RPAP3Q9H6T3 665 aaPredicted RBP27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 BIN2Q9UBW5 565 aaPredicted RBP27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 UTRNP46939 3433 aa27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 ZSCAN23Q3MJ62 389 aa27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 USH1GQ495M9 461 aa27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 FSIP1Q8NA03 581 aa27.82■■■□□ 2.04
PPP1R3F-205ENST00000495799 LIG1P18858 919 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 CMA1P23946 247 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 CLK2P49760 499 aaKnown RBP27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 SNAP25P60880 206 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 INF2Q27J81 1249 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 SH3D19Q5HYK7 790 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 JAKMIP3Q5VZ66 844 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 DLK2Q6UY11 383 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 NEK8Q86SG6 692 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 FERMT2Q96AC1 680 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 FBXO28Q9NVF7 368 aa27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 CTDP1Q9Y5B0 961 aaPredicted RBP27.81■■■□□ 2.04
PPP1R3F-205ENST00000495799 ABCB11O95342 1321 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 FLOT1O75955 427 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 PTPREP23469 700 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 PPATQ06203 517 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 AP3B2Q13367 1082 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 ZNF174Q15697 407 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 AXDND1Q5T1B0 1012 aaPredicted RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms