RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ECHDC1Q9NTX5 307 aa20.96■□□□□ 0.95
TMEM53-209ENST00000495630 MTMR4Q9NYA4 1195 aa20.96■□□□□ 0.95
TMEM53-209ENST00000495630 PLXNA1Q9UIW2 1896 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 TLR3O15455 904 aaKnown RBP20.95■□□□□ 0.94
TMEM53-209ENST00000495630 GNAT2P19087 354 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 IRX5P78411 483 aaPredicted RBP20.95■□□□□ 0.94
TMEM53-209ENST00000495630 ARMCX2Q7L311 632 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 KBTBD3Q8NAB2 608 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 GMCL1P1Q8NEA9 526 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 APPBP2Q92624 585 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 OSBP2Q969R2 916 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 FGD4Q96M96 766 aa20.95■□□□□ 0.94
TMEM53-209ENST00000495630 ADCY6O43306 1168 aa20.94■□□□□ 0.94
TMEM53-209ENST00000495630 TTLL1O95922 423 aa20.94■□□□□ 0.94
TMEM53-209ENST00000495630 ZFYP08048 801 aaPredicted RBP20.94■□□□□ 0.94
TMEM53-209ENST00000495630 CSF2RAP15509 400 aa20.94■□□□□ 0.94
TMEM53-209ENST00000495630 CCDC129Q6ZRS4 1044 aa20.94■□□□□ 0.94
TMEM53-209ENST00000495630 FAM126BQ8IXS8 530 aa20.94■□□□□ 0.94
TMEM53-209ENST00000495630 USP38Q8NB14 1042 aa20.94■□□□□ 0.94
TMEM53-209ENST00000495630 TTC28Q96AY4 2481 aa20.93■□□□□ 0.94
TMEM53-209ENST00000495630 CTAGE5O15320 804 aa20.93■□□□□ 0.94
TMEM53-209ENST00000495630 RNF113AO15541 343 aaKnown RBP20.93■□□□□ 0.94
TMEM53-209ENST00000495630 SMARCA5O60264 1052 aaPredicted RBP20.93■□□□□ 0.94
TMEM53-209ENST00000495630 PSRC1Q6PGN9 363 aaPredicted RBP20.93■□□□□ 0.94
TMEM53-209ENST00000495630 ZNF365Q70YC5 407 aa20.93■□□□□ 0.94
TMEM53-209ENST00000495630 CCDC144CPQ8IYA2 1237 aa20.93■□□□□ 0.94
TMEM53-209ENST00000495630 CEP95Q96GE4 821 aa20.93■□□□□ 0.94
TMEM53-209ENST00000495630 GAS2L1Q99501 681 aaPredicted RBP20.93■□□□□ 0.94
TMEM53-209ENST00000495630 PBX4Q9BYU1 374 aa20.93■□□□□ 0.94
TMEM53-209ENST00000495630 KATNBL1Q9H079 304 aa20.93■□□□□ 0.94
TMEM53-209ENST00000495630 PATL2C9JE40 543 aaKnown RBP20.92■□□□□ 0.94
TMEM53-209ENST00000495630 CD4P01730 458 aa20.92■□□□□ 0.94
TMEM53-209ENST00000495630 BMP3P12645 472 aa20.92■□□□□ 0.94
TMEM53-209ENST00000495630 TDO2P48775 406 aa20.92■□□□□ 0.94
TMEM53-209ENST00000495630 AKNAD1Q5T1N1 836 aa20.92■□□□□ 0.94
TMEM53-209ENST00000495630 SLFN13Q68D06 897 aa20.92■□□□□ 0.94
TMEM53-209ENST00000495630 MIER1Q8N108 512 aa20.92■□□□□ 0.94
TMEM53-209ENST00000495630 SPTBN5Q9NRC6 3674 aaKnown RBP20.92■□□□□ 0.94
TMEM53-209ENST00000495630 GRXCR1A8MXD5 290 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 GPAA1O43292 621 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 CABYRO75952 493 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 APPP05067 770 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 ACRP10323 421 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 PBX2P40425 430 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 CNTN2Q02246 1040 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 TNFAIP2Q03169 654 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 FAM133AQ8N9E0 248 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 SLC43A3Q8NBI5 491 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 NEDD1Q8NHV4 660 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 CHURC1Q8WUH1 139 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 ATXN2LQ8WWM7 1075 aaKnown RBP20.91■□□□□ 0.94
TMEM53-209ENST00000495630 HERVK_113Q902F9 699 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 SEZ6LQ9BYH1 1024 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 ACAD9Q9H845 621 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 IL23AQ9NPF7 189 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 MSRAQ9UJ68 235 aa20.91■□□□□ 0.94
TMEM53-209ENST00000495630 ASB14A6NK59 587 aa20.9■□□□□ 0.94
TMEM53-209ENST00000495630 TNFRSF10AO00220 468 aa20.9■□□□□ 0.94
TMEM53-209ENST00000495630 PRDM1O75626 825 aa20.9■□□□□ 0.94
TMEM53-209ENST00000495630 TKFCQ3LXA3 575 aa20.9■□□□□ 0.94
TMEM53-209ENST00000495630 NOL8Q76FK4 1167 aaKnown RBP20.9■□□□□ 0.94
TMEM53-209ENST00000495630 FAM160B2Q86V87 743 aa20.9■□□□□ 0.94
TMEM53-209ENST00000495630 GPATCH3Q96I76 525 aa20.9■□□□□ 0.94
TMEM53-209ENST00000495630 PPP1R12CQ9BZL4 782 aa20.9■□□□□ 0.94
TMEM53-209ENST00000495630 EPB41L4AQ9HCS5 686 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-209ENST00000495630 GREB1LQ9C091 1923 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-209ENST00000495630 TMEM232C9JQI7 657 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 FGBP02675 491 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 CYP2C18P33260 490 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 RAB30Q15771 203 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 LRRFIP1Q32MZ4 808 aaKnown RBP20.89■□□□□ 0.93
TMEM53-209ENST00000495630 IFNL3Q8IZI9 196 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 STAG1Q8WVM7 1258 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 MTIF3Q9H2K0 278 aaKnown RBP20.89■□□□□ 0.93
TMEM53-209ENST00000495630 PRDM12Q9H4Q4 367 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 HOMER2Q9NSB8 354 aa20.89■□□□□ 0.93
TMEM53-209ENST00000495630 GNEQ9Y223 722 aaKnown RBP20.89■□□□□ 0.93
TMEM53-209ENST00000495630 ZEB2O60315 1214 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 PLA2G6O60733 806 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 TSPY3P0CV98 308 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 TSPY8P0CW00 308 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 STAT2P52630 851 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 BEX3Q00994 111 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 PDE4BQ07343 736 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 IQSEC1Q6DN90 963 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 LRRC47Q8N1G4 583 aaKnown RBP20.88■□□□□ 0.93
TMEM53-209ENST00000495630 GMCL1Q96IK5 515 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 AP5M1Q9H0R1 490 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 A1CFQ9NQ94 594 aaKnown RBP20.88■□□□□ 0.93
TMEM53-209ENST00000495630 Q9Y3F1 56 aa20.88■□□□□ 0.93
TMEM53-209ENST00000495630 ASTN1O14525 1302 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.87■□□□□ 0.93
TMEM53-209ENST00000495630 SOWAHBA6NEL2 793 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 SLC3A2P08195 630 aaKnown RBP20.87■□□□□ 0.93
TMEM53-209ENST00000495630 TFAP4Q01664 338 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 ITGA7Q13683 1181 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 PPP4R3BQ5MIZ7 849 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 PPM1EQ8WY54 764 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms