RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ABHD16BQ9H3Z7 469 aa26.21■■□□□ 1.79
HDDC3-203ENST00000494993 HOMER2Q9NSB8 354 aa26.21■■□□□ 1.79
HDDC3-203ENST00000494993 LRRC37A2A6NM11 1700 aa26.21■■□□□ 1.79
HDDC3-203ENST00000494993 A0A0C4DFX4 3053 aa26.21■■□□□ 1.79
HDDC3-203ENST00000494993 LCTP09848 1927 aa26.2■■□□□ 1.79
HDDC3-203ENST00000494993 CST5P28325 142 aaPredicted RBP26.2■■□□□ 1.78
HDDC3-203ENST00000494993 SLC1A4P43007 532 aa26.2■■□□□ 1.78
HDDC3-203ENST00000494993 RRP1P56182 461 aaKnown RBP26.2■■□□□ 1.78
HDDC3-203ENST00000494993 KCNA10Q16322 511 aa26.2■■□□□ 1.78
HDDC3-203ENST00000494993 CCSAPQ6IQ19 270 aaPredicted RBP26.2■■□□□ 1.78
HDDC3-203ENST00000494993 ARMCX2Q7L311 632 aa26.2■■□□□ 1.78
HDDC3-203ENST00000494993 STAG1Q8WVM7 1258 aa26.2■■□□□ 1.78
HDDC3-203ENST00000494993 FAM161BQ96MY7 647 aa26.2■■□□□ 1.78
HDDC3-203ENST00000494993 ACAD9Q9H845 621 aa26.2■■□□□ 1.78
HDDC3-203ENST00000494993 MYADML2A6NDP7 307 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 TSPY2A6NKD2 308 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 ADCY6O43306 1168 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 RAG1P15918 1043 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 CTDSPL2Q05D32 466 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 IKQ13123 557 aaPredicted RBP26.19■■□□□ 1.78
HDDC3-203ENST00000494993 ANKRD33Q7Z3H0 272 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 TOX2Q96NM4 488 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 ZBTB47Q9UFB7 747 aaPredicted RBP26.19■■□□□ 1.78
HDDC3-203ENST00000494993 STX8Q9UNK0 236 aa26.19■■□□□ 1.78
HDDC3-203ENST00000494993 ZNF536O15090 1300 aa26.18■■□□□ 1.78
HDDC3-203ENST00000494993 MCCP23508 829 aa26.18■■□□□ 1.78
HDDC3-203ENST00000494993 CNTN2Q02246 1040 aa26.18■■□□□ 1.78
HDDC3-203ENST00000494993 CCDC144BQ3MJ40 725 aa26.18■■□□□ 1.78
HDDC3-203ENST00000494993 ANKRD45Q5TZF3 282 aa26.18■■□□□ 1.78
HDDC3-203ENST00000494993 CHMP4CQ96CF2 233 aa26.18■■□□□ 1.78
HDDC3-203ENST00000494993 TMEM39AQ9NV64 488 aa26.18■■□□□ 1.78
HDDC3-203ENST00000494993 CUL9Q8IWT3 2517 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 DCDC2CA8MYV0 355 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 PLA2G6O60733 806 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 C6orf222P0C671 652 aaPredicted RBP26.17■■□□□ 1.78
HDDC3-203ENST00000494993 IRX5P78411 483 aaPredicted RBP26.17■■□□□ 1.78
HDDC3-203ENST00000494993 FAAP100Q0VG06 881 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 CCDC144CPQ8IYA2 1237 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 FAM133AQ8N9E0 248 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 EVI5LQ96CN4 794 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 AGBL1Q96MI9 1066 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 KATNBL1Q9H079 304 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 UPF3AQ9H1J1 476 aaKnown RBP26.17■■□□□ 1.78
HDDC3-203ENST00000494993 SPC25Q9HBM1 224 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 A1CFQ9NQ94 594 aaKnown RBP26.17■■□□□ 1.78
HDDC3-203ENST00000494993 INCENPQ9NQS7 918 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 IL17RBQ9NRM6 502 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 RNF146Q9NTX7 359 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 ANAPC4Q9UJX5 808 aa26.17■■□□□ 1.78
HDDC3-203ENST00000494993 NMT2O60551 498 aa26.16■■□□□ 1.78
HDDC3-203ENST00000494993 GJA9P57773 515 aa26.16■■□□□ 1.78
HDDC3-203ENST00000494993 SMAD3P84022 425 aaKnown RBP26.16■■□□□ 1.78
HDDC3-203ENST00000494993 TKFCQ3LXA3 575 aa26.16■■□□□ 1.78
HDDC3-203ENST00000494993 VPS53Q5VIR6 699 aa26.16■■□□□ 1.78
HDDC3-203ENST00000494993 KCTD1Q719H9 257 aa26.16■■□□□ 1.78
HDDC3-203ENST00000494993 PCSK9Q8NBP7 692 aaKnown RBP26.16■■□□□ 1.78
HDDC3-203ENST00000494993 GLT1D1Q96MS3 346 aa26.16■■□□□ 1.78
HDDC3-203ENST00000494993 ELP1O95163 1332 aa26.15■■□□□ 1.78
HDDC3-203ENST00000494993 UNC80Q8N2C7 3258 aa26.15■■□□□ 1.78
HDDC3-203ENST00000494993 ASGR1P07306 291 aa26.15■■□□□ 1.78
HDDC3-203ENST00000494993 EPHB4P54760 987 aa26.15■■□□□ 1.78
HDDC3-203ENST00000494993 FPGSQ05932 587 aa26.15■■□□□ 1.78
HDDC3-203ENST00000494993 RCSD1Q6JBY9 416 aa26.15■■□□□ 1.78
HDDC3-203ENST00000494993 CRBNQ96SW2 442 aa26.15■■□□□ 1.78
HDDC3-203ENST00000494993 RASGRP2Q7LDG7 609 aa26.14■■□□□ 1.78
HDDC3-203ENST00000494993 RNPC3Q96LT9 517 aaKnown RBP26.14■■□□□ 1.78
HDDC3-203ENST00000494993 TRERF1Q96PN7 1200 aa26.14■■□□□ 1.78
HDDC3-203ENST00000494993 HELLSQ9NRZ9 838 aa26.14■■□□□ 1.78
HDDC3-203ENST00000494993 PRR12Q9ULL5 1215 aa26.14■■□□□ 1.78
HDDC3-203ENST00000494993 MROH7Q68CQ1 1323 aa26.14■■□□□ 1.77
HDDC3-203ENST00000494993 ORC4O43929 436 aa26.13■■□□□ 1.77
HDDC3-203ENST00000494993 RANBP6O60518 1105 aaKnown RBP26.13■■□□□ 1.77
HDDC3-203ENST00000494993 ALAS1P13196 640 aa26.13■■□□□ 1.77
HDDC3-203ENST00000494993 NOVP48745 357 aa26.13■■□□□ 1.77
HDDC3-203ENST00000494993 PDE1AP54750 535 aa26.13■■□□□ 1.77
HDDC3-203ENST00000494993 ALX1Q15699 326 aa26.13■■□□□ 1.77
HDDC3-203ENST00000494993 CCDC174Q6PII3 467 aa26.13■■□□□ 1.77
HDDC3-203ENST00000494993 SOWAHBA6NEL2 793 aa26.12■■□□□ 1.77
HDDC3-203ENST00000494993 CDK7P50613 346 aa26.12■■□□□ 1.77
HDDC3-203ENST00000494993 SNAP25P60880 206 aa26.12■■□□□ 1.77
HDDC3-203ENST00000494993 HDAC1Q13547 482 aaPredicted RBP26.12■■□□□ 1.77
HDDC3-203ENST00000494993 GNASQ5JWF2 1037 aa26.12■■□□□ 1.77
HDDC3-203ENST00000494993 SEMA6BQ9H3T3 888 aa26.12■■□□□ 1.77
HDDC3-203ENST00000494993 TBX21Q9UL17 535 aa26.12■■□□□ 1.77
HDDC3-203ENST00000494993 A0A0U1RQG5 324 aaPredicted RBP26.11■■□□□ 1.77
HDDC3-203ENST00000494993 ASB14A6NK59 587 aa26.11■■□□□ 1.77
HDDC3-203ENST00000494993 CTAGE5O15320 804 aa26.11■■□□□ 1.77
HDDC3-203ENST00000494993 FGRP09769 529 aa26.11■■□□□ 1.77
HDDC3-203ENST00000494993 NKX3-2P78367 333 aa26.11■■□□□ 1.77
HDDC3-203ENST00000494993 CDX2Q99626 313 aaPredicted RBP26.11■■□□□ 1.77
HDDC3-203ENST00000494993 MTMR7Q9Y216 660 aa26.11■■□□□ 1.77
HDDC3-203ENST00000494993 CDH23Q9H251 3354 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.1■■□□□ 1.77
HDDC3-203ENST00000494993 TIMP1P01033 207 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 TNFAIP2Q03169 654 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 MUM1L1Q5H9M0 696 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 DCAF4Q8WV16 495 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 VTI1AQ96AJ9 217 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 FAM227BQ96M60 508 aa26.1■■□□□ 1.77
HDDC3-203ENST00000494993 TTYH1Q9H313 450 aaPredicted RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms