RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SIAH1Q8IUQ4 282 aa21.08■□□□□ 0.97
TSPAN4-212ENST00000494815 GMCL1P1Q8NEA9 526 aa21.08■□□□□ 0.97
TSPAN4-212ENST00000494815 PNMA6FA0A0J9YX94 578 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 WNT7AO00755 349 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 TBC1D12O60347 775 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 ZNF174Q15697 407 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 SHROOM1Q2M3G4 852 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 PPP1R18Q6NYC8 613 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 ELOA2Q8IYF1 753 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 ADGRF4Q8IZF3 695 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 GTPBP4Q9BZE4 634 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 JMJD4Q9H9V9 463 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 CBX8Q9HC52 389 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 KIAA1468Q9P260 1216 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 SMCO2A6NFE2 343 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 GH2P01242 217 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 KRT25Q7Z3Z0 450 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 ANO10Q9NW15 660 aa21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 ZHX1Q9UKY1 873 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-212ENST00000494815 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 SLC1A4P43007 532 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 GRIN1Q05586 938 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 PTGDRQ13258 359 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 SLFN13Q68D06 897 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 RASGRP4Q8TDF6 673 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 MTMR8Q96EF0 704 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 FZD9O00144 591 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 CCDC186Q7Z3E2 898 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 PLA2G4DQ86XP0 818 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 DPF2Q92785 391 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 GMCL1Q96IK5 515 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 CSRNP2Q9H175 543 aa21.06■□□□□ 0.96
TSPAN4-212ENST00000494815 RRP1BQ14684 758 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-212ENST00000494815 NBPF9Q3BBW0 867 aa21.05■□□□□ 0.96
TSPAN4-212ENST00000494815 ARL6IP4Q66PJ3 421 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-212ENST00000494815 TTBK2Q6IQ55 1244 aa21.05■□□□□ 0.96
TSPAN4-212ENST00000494815 KCTD1Q719H9 257 aa21.05■□□□□ 0.96
TSPAN4-212ENST00000494815 ZBTB5O15062 677 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 TNNI2P48788 182 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 ZNF165P49910 485 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 ZNF75DP51815 510 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 RASSF7Q02833 373 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 SYCP1Q15431 976 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 KRBA2Q6ZNG9 492 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 TMEM39BQ9GZU3 492 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 DNAJC25Q9H1X3 360 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 F5H6K3 240 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 MCM7P33993 719 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 JAG1P78504 1218 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 KLRC3Q07444 240 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 SPECC1Q5M775 1068 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 REXO1Q8N1G1 1221 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 NLGN2Q8NFZ4 835 aa21.04■□□□□ 0.96
TSPAN4-212ENST00000494815 ZRSR1Q15695 479 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 PGAP2Q9UHJ9 254 aa21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 HOOK1Q9UJC3 728 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 MAP3K10Q02779 954 aa21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 TNFAIP1Q13829 316 aa21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 NONOQ15233 471 aaKnown RBP eCLIP21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 LONRF3Q496Y0 759 aa21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 DRC7Q8IY82 874 aa21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 CNNM3Q8NE01 707 aa21.03■□□□□ 0.96
TSPAN4-212ENST00000494815 SMTNL1A8MU46 457 aa21.02■□□□□ 0.96
TSPAN4-212ENST00000494815 SLC16A2P36021 539 aa21.02■□□□□ 0.96
TSPAN4-212ENST00000494815 ADCY7P51828 1080 aa21.02■□□□□ 0.96
TSPAN4-212ENST00000494815 INF2Q27J81 1249 aa21.02■□□□□ 0.96
TSPAN4-212ENST00000494815 TRIM5Q9C035 493 aa21.02■□□□□ 0.96
TSPAN4-212ENST00000494815 SHTN1A0MZ66 631 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 USP17L10C9JJH3 530 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 LAD1O00515 517 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 NDUFB10O96000 172 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 GMPSP49915 693 aaPredicted RBP21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 PRELPP51888 382 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 LRMPQ12912 555 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 C4orf32Q8N8J7 132 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 ARHGEF10LQ9HCE6 1279 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 TUBE1Q9UJT0 475 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 ZBTB21Q9ULJ3 1066 aa21.02■□□□□ 0.95
TSPAN4-212ENST00000494815 POLR2DO15514 142 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-212ENST00000494815 RAD21O60216 631 aa21.01■□□□□ 0.95
TSPAN4-212ENST00000494815 ORC2Q13416 577 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-212ENST00000494815 KANK3Q6NY19 840 aa21.01■□□□□ 0.95
TSPAN4-212ENST00000494815 CEP57L1Q8IYX8 460 aa21.01■□□□□ 0.95
TSPAN4-212ENST00000494815 COA7Q96BR5 231 aa21.01■□□□□ 0.95
TSPAN4-212ENST00000494815 NAT10Q9H0A0 1025 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-212ENST00000494815 PPP1R11O60927 126 aaPredicted RBP21■□□□□ 0.95
TSPAN4-212ENST00000494815 MICALL2Q8IY33 904 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 ERCC4Q92889 916 aaPredicted RBP21■□□□□ 0.95
TSPAN4-212ENST00000494815 FEZ1Q99689 392 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 SPON1Q9HCB6 807 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 RIC8AQ9NPQ8 531 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 NRBP1Q9UHY1 535 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 VWA3AA6NCI4 1184 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 NCBP1Q09161 790 aaKnown RBP21■□□□□ 0.95
TSPAN4-212ENST00000494815 C11orf57Q6ZUT1 292 aaPredicted RBP21■□□□□ 0.95
TSPAN4-212ENST00000494815 CDAN1Q8IWY9 1227 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 SYMPKQ92797 1274 aaKnown RBP21■□□□□ 0.95
TSPAN4-212ENST00000494815 CCDC34Q96HJ3 373 aa21■□□□□ 0.95
TSPAN4-212ENST00000494815 A0A1W2PRG0 241 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 304 ms