RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ANKS1AQ92625 1134 aa20.68■□□□□ 0.9
HDAC4-211ENST00000494800 MAP4K1Q92918 833 aa20.68■□□□□ 0.9
HDAC4-211ENST00000494800 DDX20Q9UHI6 824 aaKnown RBP20.68■□□□□ 0.9
HDAC4-211ENST00000494800 NRBP1Q9UHY1 535 aa20.68■□□□□ 0.9
HDAC4-211ENST00000494800 SNHG28P0DPA3 235 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 CYBAP13498 195 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 SLC16A2P36021 539 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 SART3Q15020 963 aaKnown RBP20.67■□□□□ 0.9
HDAC4-211ENST00000494800 RASGRP2Q7LDG7 609 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 ENAHQ8N8S7 591 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-211ENST00000494800 NCOA7Q8NI08 942 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 DPF3Q92784 378 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 AGBL1Q96MI9 1066 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 TINF2Q9BSI4 451 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 ESYT1Q9BSJ8 1104 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 RNF146Q9NTX7 359 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 CCPG1Q9ULG6 757 aa20.67■□□□□ 0.9
HDAC4-211ENST00000494800 IGHA2P01877 340 aa20.66■□□□□ 0.9
HDAC4-211ENST00000494800 ICAM1P05362 532 aa20.66■□□□□ 0.9
HDAC4-211ENST00000494800 ALAS1P13196 640 aa20.66■□□□□ 0.9
HDAC4-211ENST00000494800 TTBK2Q6IQ55 1244 aa20.66■□□□□ 0.9
HDAC4-211ENST00000494800 PAWRQ96IZ0 340 aaKnown RBP20.66■□□□□ 0.9
HDAC4-211ENST00000494800 TRERF1Q96PN7 1200 aa20.66■□□□□ 0.9
HDAC4-211ENST00000494800 RANBP17Q9H2T7 1088 aaKnown RBP20.66■□□□□ 0.9
HDAC4-211ENST00000494800 CNPY2Q9Y2B0 182 aa20.66■□□□□ 0.9
HDAC4-211ENST00000494800 RBM8AQ9Y5S9 174 aaKnown RBP20.66■□□□□ 0.9
HDAC4-211ENST00000494800 PFASO15067 1338 aa20.65■□□□□ 0.9
HDAC4-211ENST00000494800 ZNF536O15090 1300 aa20.65■□□□□ 0.9
HDAC4-211ENST00000494800 E7EWF7 191 aa20.65■□□□□ 0.9
HDAC4-211ENST00000494800 SEPT4O43236 478 aa20.65■□□□□ 0.9
HDAC4-211ENST00000494800 ASPRV1Q53RT3 343 aa20.65■□□□□ 0.9
HDAC4-211ENST00000494800 LHX8Q68G74 356 aa20.65■□□□□ 0.9
HDAC4-211ENST00000494800 ZNF467Q7Z7K2 595 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-211ENST00000494800 ANO2Q9NQ90 1003 aa20.65■□□□□ 0.9
HDAC4-211ENST00000494800 SYNGAP1Q96PV0 1343 aa20.64■□□□□ 0.89
HDAC4-211ENST00000494800 DNAJC25-GNG10A0A024R161 153 aa20.64■□□□□ 0.89
HDAC4-211ENST00000494800 CDC45O75419 566 aa20.64■□□□□ 0.89
HDAC4-211ENST00000494800 SNAP25P60880 206 aa20.64■□□□□ 0.89
HDAC4-211ENST00000494800 SKAP1Q86WV1 359 aa20.64■□□□□ 0.89
HDAC4-211ENST00000494800 C11orf49Q9H6J7 331 aa20.64■□□□□ 0.89
HDAC4-211ENST00000494800 MKI67P46013 3256 aaKnown RBP20.63■□□□□ 0.89
HDAC4-211ENST00000494800 POTEB2H3BUK9 544 aa20.63■□□□□ 0.89
HDAC4-211ENST00000494800 IFIT3O14879 490 aaKnown RBP20.63■□□□□ 0.89
HDAC4-211ENST00000494800 PARP1P09874 1014 aaKnown RBP20.63■□□□□ 0.89
HDAC4-211ENST00000494800 ERICH6BQ5W0A0 696 aa20.63■□□□□ 0.89
HDAC4-211ENST00000494800 TRPV1Q8NER1 839 aa20.63■□□□□ 0.89
HDAC4-211ENST00000494800 NR2E3Q9Y5X4 410 aa20.63■□□□□ 0.89
HDAC4-211ENST00000494800 GOLGA8HP0CJ92 632 aa20.62■□□□□ 0.89
HDAC4-211ENST00000494800 RNF20Q5VTR2 975 aa20.62■□□□□ 0.89
HDAC4-211ENST00000494800 MAMDC4Q6UXC1 1216 aa20.62■□□□□ 0.89
HDAC4-211ENST00000494800 CYB5R4Q7L1T6 521 aa20.62■□□□□ 0.89
HDAC4-211ENST00000494800 ARRDC4Q8NCT1 418 aa20.62■□□□□ 0.89
HDAC4-211ENST00000494800 DIS3LQ8TF46 1054 aaKnown RBP20.62■□□□□ 0.89
HDAC4-211ENST00000494800 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
HDAC4-211ENST00000494800 A1CFQ9NQ94 594 aaKnown RBP20.62■□□□□ 0.89
HDAC4-211ENST00000494800 DHX16O60231 1041 aaKnown RBP20.61■□□□□ 0.89
HDAC4-211ENST00000494800 EVI5O60447 810 aa20.61■□□□□ 0.89
HDAC4-211ENST00000494800 WTAPQ15007 396 aa20.61■□□□□ 0.89
HDAC4-211ENST00000494800 PRAMEF19Q5SWL8 479 aa20.61■□□□□ 0.89
HDAC4-211ENST00000494800 WDR19Q8NEZ3 1342 aa20.6■□□□□ 0.89
HDAC4-211ENST00000494800 RARBP10826 455 aa20.6■□□□□ 0.89
HDAC4-211ENST00000494800 AKR1A1P14550 325 aa20.6■□□□□ 0.89
HDAC4-211ENST00000494800 SEC23AQ15436 765 aa20.6■□□□□ 0.89
HDAC4-211ENST00000494800 NSMFQ6X4W1 530 aa20.6■□□□□ 0.89
HDAC4-211ENST00000494800 ASB14A6NK59 587 aa20.59■□□□□ 0.89
HDAC4-211ENST00000494800 DNM1LO00429 736 aa20.59■□□□□ 0.89
HDAC4-211ENST00000494800 TMEM67Q5HYA8 995 aa20.59■□□□□ 0.89
HDAC4-211ENST00000494800 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
HDAC4-211ENST00000494800 CYP39A1Q9NYL5 469 aa20.59■□□□□ 0.89
HDAC4-211ENST00000494800 ZHX1Q9UKY1 873 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-211ENST00000494800 PDE4DIPQ5VU43 2346 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 KBTBD13C9JR72 458 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 SLC27A2O14975 620 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 CDC37Q16543 378 aaPredicted RBP20.58■□□□□ 0.89
HDAC4-211ENST00000494800 MUM1L1Q5H9M0 696 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 STOX1Q6ZVD7 989 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 CATIPQ7Z7H3 387 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 FAM133AQ8N9E0 248 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 MTA3Q9BTC8 594 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 ABHD16BQ9H3Z7 469 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.58■□□□□ 0.89
HDAC4-211ENST00000494800 PPP4R2Q9NY27 417 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 ADD3Q9UEY8 706 aaKnown RBP20.58■□□□□ 0.89
HDAC4-211ENST00000494800 FAM184BQ9ULE4 1060 aa20.58■□□□□ 0.89
HDAC4-211ENST00000494800 ZNFX1Q9P2E3 1918 aaKnown RBP20.57■□□□□ 0.88
HDAC4-211ENST00000494800 PTPDC1A2A3K4 754 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 MYCNP04198 464 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-211ENST00000494800 MCM5P33992 734 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 MNX1P50219 401 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-211ENST00000494800 CNTN2Q02246 1040 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 NECTIN1Q15223 517 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 ANO1Q5XXA6 986 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 ARMCX2Q7L311 632 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 CHST3Q7LGC8 479 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 MB21D2Q8IYB1 491 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-211ENST00000494800 ADGRF4Q8IZF3 695 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 MPHOSPH6Q99547 160 aaKnown RBP20.57■□□□□ 0.88
HDAC4-211ENST00000494800 XPNPEP3Q9NQH7 507 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 PLXNA1Q9UIW2 1896 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms