RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 CRELD2Q6UXH1 353 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 ITIH6Q6UXX5 1313 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 NFXL1Q6ZNB6 911 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 VASH1Q7L8A9 365 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 TRIM46Q7Z4K8 759 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 DEFB132Q7Z7B7 95 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ZBTB33Q86T24 672 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 FERMT3Q86UX7 667 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 TXNDC2Q86VQ3 553 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 CCDC170Q8IYT3 715 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 FMR1NBQ8N0W7 255 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 THEMISQ8N1K5 641 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 TSPYL6Q8N831 410 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 TC2NQ8N9U0 490 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 FSIP1Q8NA03 581 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 C1orf131Q8NDD1 294 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 CCDC148Q8NFR7 591 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 TRIM58Q8NG06 486 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ATL2Q8NHH9 583 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 RASSF8Q8NHQ8 419 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 FAM174AQ8TBP5 190 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 PI4K2BQ8TCG2 481 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 MIPOL1Q8TD10 442 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ZNF473Q8WTR7 871 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 RUFY2Q8WXA3 655 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 RILPL2Q969X0 211 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ZBTB10Q96DT7 871 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 SPDL1Q96EA4 605 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ACSBG1Q96GR2 724 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ZNF396Q96N95 335 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 PLEKHG4BQ96PX9 1271 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ALS2CR12Q96Q35 445 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 CDK15Q96Q40 435 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 PANX2Q96RD6 677 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 KCTD15Q96SI1 283 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 NAPGQ99747 312 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 SELENOOQ9BVL4 669 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 CDCA7Q9BWT1 371 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 MOV10L1Q9BXT6 1211 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 QTRT2Q9H974 415 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 MRPL44Q9H9J2 332 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 SUGCTQ9HAC7 445 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 KIF9Q9HAQ2 790 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 PRDM16Q9HAZ2 1276 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 SENP2Q9HC62 589 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 SALL1Q9NSC2 1324 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 HMG20BQ9P0W2 317 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 RCOR1Q9UKL0 485 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 TPX2Q9ULW0 747 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 C15orf41Q9Y2V0 281 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ARID2Q68CP9 1835 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 PAPPAQ13219 1627 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 NHSL1Q5SYE7 1610 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 GLI3P10071 1580 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 MROH7-TTC4A0A0A0MT08 1334 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ADGRF5Q8IZF2 1346 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CTAGE9A4FU28 777 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 GOLGA6BA6NDN3 693 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 C5orf60A6NFR6 353 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CFAP73A6NFT4 308 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SOBPA7XYQ1 873 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ZBBXA8MT70 800 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 AGPSO00116 658 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 HIP1O00291 1037 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 BIN1O00499 593 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 MGRN1O60291 552 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 BUB1BO60566 1050 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 PHACTR2O75167 634 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 YEATS4O95619 227 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ATP6V1G2O95670 118 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ADH1CP00326 375 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 GNAI2P04899 355 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 VIMP08670 466 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 FAM163BP0C2L3 166 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 PDHBP11177 359 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ALADP13716 330 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 RPS6KB1P23443 525 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 PRKAR2BP31323 418 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ADD1P35611 737 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 PEX19P40855 299 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SCTRP47872 440 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 EPHB4P54760 987 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 UBASH3AP57075 661 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 WDR4P57081 412 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 PTK2Q05397 1052 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ITIH3Q06033 890 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 NR1H3Q13133 447 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 PSMD2Q13200 908 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 RIPK1Q13546 671 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 LAMB3Q13751 1172 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 BLMHQ13867 455 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 TOB2Q14106 344 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 KARSQ15046 597 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 ZRSR2Q15696 482 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 CDC37Q16543 378 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 KIAA0753Q2KHM9 967 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 KRT24Q2M2I5 525 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CCDC96Q2M329 555 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CFAP100Q494V2 611 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 PKDCCQ504Y2 493 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms