RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ASGR1P07306 291 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 BMP3P12645 472 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 DNAJB2P25686 324 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 SLC1A4P43007 532 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 STAT2P52630 851 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
UBR4-216ENST00000494503 FAAP100Q0VG06 881 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 CCDC174Q6PII3 467 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 ARMCX2Q7L311 632 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 PPM1EQ8WY54 764 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 ABHD16BQ9H3Z7 469 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 MTMR4Q9NYA4 1195 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
UBR4-216ENST00000494503 A0A0U1RQG5 324 aaPredicted RBP11.44□□□□□ -0.58
UBR4-216ENST00000494503 TSPY2A6NKD2 308 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 ERC2O15083 957 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 TIMP1P01033 207 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 ALAS1P13196 640 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 BEX3Q00994 111 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 TFAP4Q01664 338 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 PPIGQ13427 754 aaKnown RBP eCLIP11.44□□□□□ -0.584e-8■■■□□ 19
UBR4-216ENST00000494503 CCDC96Q2M329 555 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 EEPD1Q7L9B9 569 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 IFNL3Q8IZI9 196 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 CHST13Q8NET6 341 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 SEC62Q99442 399 aaKnown RBP11.44□□□□□ -0.58
UBR4-216ENST00000494503 ACAD9Q9H845 621 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 SLC38A10Q9HBR0 1119 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 RNF146Q9NTX7 359 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 PRUNE2Q8WUY3 3088 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 VCANP13611 3396 aa11.44□□□□□ -0.58
UBR4-216ENST00000494503 DNAJC25-GNG10A0A024R161 153 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.43□□□□□ -0.58
UBR4-216ENST00000494503 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.43□□□□□ -0.58
UBR4-216ENST00000494503 PATL2C9JE40 543 aaKnown RBP11.43□□□□□ -0.58
UBR4-216ENST00000494503 ACRP10323 421 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 MCCP23508 829 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 SNAP25P60880 206 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 CNTN2Q02246 1040 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 TNFAIP2Q03169 654 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 PPARAQ07869 468 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 MAMDC4Q6UXC1 1216 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 KCTD1Q719H9 257 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 ANKRD33Q7Z3H0 272 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
UBR4-216ENST00000494503 TMEM199Q8N511 208 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 GMCL1P1Q8NEA9 526 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 KLHDC9Q8NEP7 349 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 TIFAQ96CG3 184 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 AGBL1Q96MI9 1066 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 TOX2Q96NM4 488 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.43□□□□□ -0.588e-9■□□□□ 9
UBR4-216ENST00000494503 AP5M1Q9H0R1 490 aa11.43□□□□□ -0.58
UBR4-216ENST00000494503 ELP1O95163 1332 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 ARVCFO00192 962 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 ATP2A1O14983 1001 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 ADCY6O43306 1168 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 RANBP6O60518 1105 aaKnown RBP11.42□□□□□ -0.58
UBR4-216ENST00000494503 CSF2RAP15509 400 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 OAZ1P54368 228 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 CTDSPL2Q05D32 466 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 GRIN2CQ14957 1233 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 MFSD5Q6N075 450 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 CXCL17Q6UXB2 119 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 NSMFQ6X4W1 530 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 TLK2Q86UE8 772 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 FAM160B2Q86V87 743 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 CHURC1Q8WUH1 139 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 TRERF1Q96PN7 1200 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 GAS2L1Q99501 681 aaPredicted RBP11.42□□□□□ -0.58
UBR4-216ENST00000494503 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 DCTPP1Q9H773 170 aa11.42□□□□□ -0.58
UBR4-216ENST00000494503 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
UBR4-216ENST00000494503 TMEM265A0A087WTH1 108 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.41□□□□□ -0.58
UBR4-216ENST00000494503 ASB14A6NK59 587 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 GRXCR1A8MXD5 290 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 ZEB2O60315 1214 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 CST5P28325 142 aaPredicted RBP11.41□□□□□ -0.58
UBR4-216ENST00000494503 GJA9P57773 515 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 RRP12Q5JTH9 1297 aaKnown RBP11.41□□□□□ -0.58
UBR4-216ENST00000494503 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 FBXO16Q8IX29 292 aaPredicted RBP11.41□□□□□ -0.58
UBR4-216ENST00000494503 MKL1Q969V6 931 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
UBR4-216ENST00000494503 TBX21Q9UL17 535 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 CCPG1Q9ULG6 757 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
UBR4-216ENST00000494503 GBF1Q92538 1859 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 TTC41PQ6P2S7 1318 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 DYNC1LI2O43237 492 aaPredicted RBP11.4□□□□□ -0.58
UBR4-216ENST00000494503 NMT2O60551 498 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 FDX1P10109 184 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 MX1P20591 662 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 IGFBP4P22692 258 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 PTGS1P23219 599 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms