RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LRRC47Q8N1G4 583 aaKnown RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 CRYGNQ8WXF5 182 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 MRPS27Q92552 414 aaKnown RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 UBA5Q9GZZ9 404 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 BRMS1Q9HCU9 246 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 HACL1Q9UJ83 578 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 PCDHB13Q9Y5F0 798 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 MYH6P13533 1939 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 MYH8P13535 1937 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 SYCE3A1L190 88 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 FAM205CA6NFA0 338 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 TRIM75PA6NK02 468 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 MPHOSPH10O00566 681 aaKnown RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 GDF11O95390 407 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 SLC1A4P43007 532 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 MDM2Q00987 491 aaPredicted RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 NOM1Q5C9Z4 860 aaKnown RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 KIAA1755Q5JYT7 1200 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 L1TD1Q5T7N2 865 aaKnown RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 APOBEC3FQ8IUX4 373 aaKnown RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 KRI1Q8N9T8 703 aaKnown RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 ACER1Q8TDN7 264 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 MARVELD3Q96A59 401 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 FERMT2Q96AC1 680 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 WDR18Q9BV38 432 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 KIAA1683Q9H0B3 1180 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 GLT8D2Q9H1C3 349 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 CPVLQ9H3G5 476 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 VCPKMTQ9H867 229 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 GRPEL1Q9HAV7 217 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 VEZTQ9HBM0 779 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 C6orf50Q9HD87 102 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 RIC8AQ9NPQ8 531 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 CEP131Q9UPN4 1083 aa7.78□□□□□ -1.16
MSH5-217ENST00000494458 BAZ2BQ9UIF8 2168 aaKnown RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
MSH5-217ENST00000494458 GOLGA6L4A6NEF3 574 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 SMCO2A6NFE2 343 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 USP17L10C9JJH3 530 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 LAD1O00515 517 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 SNPHO15079 494 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 ZNF202O95125 648 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 BMP3P12645 472 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 PRPHP41219 470 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 EPS15P42566 896 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 ECE1P42892 770 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 ME1P48163 572 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 NDUFA8P51970 172 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 GHRHRQ02643 423 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 CEBPZQ03701 1054 aaKnown RBP7.77□□□□□ -1.17
MSH5-217ENST00000494458 TBC1D10BQ4KMP7 808 aaPredicted RBP7.77□□□□□ -1.17
MSH5-217ENST00000494458 TTC38Q5R3I4 469 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 NOL9Q5SY16 702 aaKnown RBP7.77□□□□□ -1.17
MSH5-217ENST00000494458 MCTP2Q6DN12 878 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 KCTD1Q719H9 257 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 KRT25Q7Z3Z0 450 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 IFNL1Q8IU54 200 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 SPATA20Q8TB22 786 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 BICD2Q8TD16 824 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 TRPM4Q8TD43 1214 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 ZC3H15Q8WU90 426 aaKnown RBP7.77□□□□□ -1.17
MSH5-217ENST00000494458 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.17
MSH5-217ENST00000494458 HOOK2Q96ED9 719 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 MBOAT7Q96N66 472 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 TRIM34Q9BYJ4 488 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 RBSNQ9H1K0 784 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 NUP62CLQ9H1M0 184 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 ARHGEF10LQ9HCE6 1279 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 SEC63Q9UGP8 760 aaKnown RBP7.77□□□□□ -1.17
MSH5-217ENST00000494458 NOL7Q9UMY1 257 aaKnown RBP7.77□□□□□ -1.17
MSH5-217ENST00000494458 MYH4Q9Y623 1939 aa7.77□□□□□ -1.17
MSH5-217ENST00000494458 FRMPD2Q68DX3 1309 aaPredicted RBP7.77□□□□□ -1.17
MSH5-217ENST00000494458 CYP3A7-CYP3A51PA0A087WV96 503 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 A0A1B0GVL5 298 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 PIK3CDO00329 1044 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 CAVIN2O95810 425 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 PFKFB1P16118 471 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 CYP3A7P24462 503 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 MARCKSP29966 332 aaPredicted RBP7.76□□□□□ -1.17
MSH5-217ENST00000494458 NAPAP54920 295 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 GRIN1Q05586 938 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 GNL2Q13823 731 aaKnown RBP7.76□□□□□ -1.17
MSH5-217ENST00000494458 IL17AQ16552 155 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 MAP3K11Q16584 847 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 QRICH1Q2TAL8 776 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 UVSSAQ2YD98 709 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 NBPF12Q5TAG4 269 aaPredicted RBP7.76□□□□□ -1.17
MSH5-217ENST00000494458 NT5DC1Q5TFE4 455 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 SYDE2Q5VT97 1194 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 PPP4R3AQ6IN85 833 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 PIK3AP1Q6ZUJ8 805 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 MIGA2Q7L4E1 593 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 HEATR3Q7Z4Q2 680 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 FSIP1Q8NA03 581 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 LPAR1Q92633 364 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 KLRG1Q96E93 195 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 C12orf42Q96LP6 360 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 CLIC6Q96NY7 704 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 MTMR9Q96QG7 549 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 MAF1Q9H063 256 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms