RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TTBK2Q6IQ55 1244 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 SULF2Q8IWU5 870 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 TTC5Q8N0Z6 440 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 Q8N3U1 123 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 DRC1Q96MC2 740 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 EMILIN2Q9BXX0 1053 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
PTCD3-219ENST00000494323 CCSER2Q9H7U1 834 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
PTCD3-219ENST00000494323 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-219ENST00000494323 PCDHGB7Q9Y5F8 929 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 ADAMTS7Q9UKP4 1686 aa6.89□□□□□ -1.31
PTCD3-219ENST00000494323 CARMIL3Q8ND23 1372 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 A0A087WZG4 1122 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 NPHP1O15259 732 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 PAGE1O75459 146 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 DDNO94850 711 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-219ENST00000494323 HSPA1AP0DMV8 641 aaKnown RBP6.88□□□□□ -1.31
PTCD3-219ENST00000494323 HSPA1BP0DMV9 641 aaKnown RBP6.88□□□□□ -1.31
PTCD3-219ENST00000494323 ARNTP27540 789 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 PDE6BP35913 854 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 PIP4K2AP48426 406 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-219ENST00000494323 TNNI2P48788 182 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 LIG3P49916 1009 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 TEFQ10587 303 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 LRRC14Q15048 493 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 PRSS36Q5K4E3 855 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 PCNX4Q63HM2 1172 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 HGSNATQ68CP4 663 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 PRR5LQ6MZQ0 368 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 ZNF790Q6PG37 636 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 USP48Q86UV5 1035 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 KLHDC7BQ96G42 594 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-219ENST00000494323 BRIP1Q9BX63 1249 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
PTCD3-219ENST00000494323 KIF7Q2M1P5 1343 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 CLSPNQ9HAW4 1339 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 GNAT3A8MTJ3 354 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 CD68P34810 354 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-219ENST00000494323 HNRNPUQ00839 825 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTCD3-219ENST00000494323 MAP3K11Q16584 847 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 HP1BP3Q5SSJ5 553 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-219ENST00000494323 SCARA3Q6AZY7 606 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 AGMOQ6ZNB7 445 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 ZNF654Q8IZM8 581 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 SLC43A3Q8NBI5 491 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 PHACTR3Q96KR7 559 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 TMEM74Q96NL1 305 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 CORO1BQ9BR76 489 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 TRIM56Q9BRZ2 755 aaKnown RBP6.87□□□□□ -1.31
PTCD3-219ENST00000494323 TEX13AQ9BXU3 409 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-219ENST00000494323 AKTIPQ9H8T0 292 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 KBTBD4Q9NVX7 518 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 USP16Q9Y5T5 823 aa6.87□□□□□ -1.31
PTCD3-219ENST00000494323 VIRMAQ69YN4 1812 aaKnown RBP6.87□□□□□ -1.31
PTCD3-219ENST00000494323 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 PRAMEF22A3QJZ6 481 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 BTBD11A6QL63 1104 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 TM4SF5O14894 197 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 BMP6P22004 513 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 GBP2P32456 591 aaPredicted RBP6.86□□□□□ -1.31
PTCD3-219ENST00000494323 IL6STP40189 918 aaPredicted RBP6.86□□□□□ -1.31
PTCD3-219ENST00000494323 POU4F3Q15319 338 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 SF3A1Q15459 793 aaKnown RBP6.86□□□□□ -1.31
PTCD3-219ENST00000494323 OLFM4Q6UX06 510 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 NRSN2Q9GZP1 204 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 TAOK3Q9H2K8 898 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 COPRSQ9NQ92 184 aa6.86□□□□□ -1.31
PTCD3-219ENST00000494323 SLX4Q8IY92 1834 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 HEG1Q9ULI3 1381 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 TNRC6CQ9HCJ0 1690 aaKnown RBP6.85□□□□□ -1.31
PTCD3-219ENST00000494323 SCO2A0A1W2PP80 73 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 CAMTA2O94983 1202 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 GSTP1P09211 210 aaKnown RBP6.85□□□□□ -1.31
PTCD3-219ENST00000494323 SRGNP10124 158 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 NLRP12P59046 1061 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
PTCD3-219ENST00000494323 LLGL2Q6P1M3 1020 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 CNBD1Q8NA66 436 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 FMNL2Q96PY5 1086 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 USP26Q9BXU7 913 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 CBX8Q9HC52 389 aa6.85□□□□□ -1.31
PTCD3-219ENST00000494323 NRXN2Q9P2S2 1712 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 ANKRD31Q8N7Z5 1873 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-219ENST00000494323 ALX3O95076 343 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 MAOBP27338 520 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 PRKAR2BP31323 418 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 ST5P78524 1137 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 LMNB2Q03252 620 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 ZNF252P-AS1Q0IIN9 211 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-219ENST00000494323 STYK1Q6J9G0 422 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-219ENST00000494323 MCM10Q7L590 875 aa6.84□□□□□ -1.31
PTCD3-219ENST00000494323 PDZD3Q86UT5 571 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms