RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PCDHA5Q9Y5H7 936 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 ARHGEF16Q5VV41 709 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 PRDM15P57071 1507 aaPredicted RBP21.06■□□□□ 0.96
COL27A1-207ENST00000494090 HHATQ5VTY9 493 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 ZNF589Q86UQ0 364 aaPredicted RBP21.06■□□□□ 0.96
COL27A1-207ENST00000494090 CD2APQ9Y5K6 639 aa21.06■□□□□ 0.96
COL27A1-207ENST00000494090 GOLGA8KD6RF30 607 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 SEMA3EO15041 775 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 FMNL1O95466 1100 aaPredicted RBP21.05■□□□□ 0.96
COL27A1-207ENST00000494090 CHRNDQ07001 517 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 MRRFQ96E11 262 aaKnown RBP21.05■□□□□ 0.96
COL27A1-207ENST00000494090 RABEP2Q9H5N1 569 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 MYO1AQ9UBC5 1043 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 ARMCX3Q9UH62 379 aaPredicted RBP21.05■□□□□ 0.96
COL27A1-207ENST00000494090 ATF7P17544 494 aaPredicted RBP21.05■□□□□ 0.96
COL27A1-207ENST00000494090 ARHGAP24Q8N264 748 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 PANK4Q9NVE7 773 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 TRAPPC10P48553 1259 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 TMC4Q7Z404 712 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 GSDMBQ8TAX9 411 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 PPP1R13BQ96KQ4 1090 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 EPN1Q9Y6I3 576 aaPredicted RBP21.05■□□□□ 0.96
COL27A1-207ENST00000494090 FOSP01100 380 aaPredicted RBP21.05■□□□□ 0.96
COL27A1-207ENST00000494090 COPB1P53618 953 aaKnown RBP21.05■□□□□ 0.96
COL27A1-207ENST00000494090 NEDD9Q14511 834 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 DPY19L2Q6NUT2 758 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 APOA5Q6Q788 366 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 GREM2Q9H772 168 aa21.05■□□□□ 0.96
COL27A1-207ENST00000494090 PHKA1P46020 1223 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 P3H4Q92791 437 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 RNF26Q9BY78 433 aaPredicted RBP21.04■□□□□ 0.96
COL27A1-207ENST00000494090 RCOR1Q9UKL0 485 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 SAMD9LQ8IVG5 1584 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 ADORA1P30542 326 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 GABPAQ06546 454 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 VSIG1Q86XK7 387 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 CCDC89Q8N998 374 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 ADPGKQ9BRR6 497 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 PUS3Q9BZE2 481 aaKnown RBP21.04■□□□□ 0.96
COL27A1-207ENST00000494090 METTL14Q9HCE5 456 aaKnown RBP21.04■□□□□ 0.96
COL27A1-207ENST00000494090 A0A1B0GUA9 196 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 I3L4J1 428 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 PRKG1Q13976 671 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 ZSCAN26Q16670 478 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 SIRT2Q8IXJ6 389 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 GDAP1L1Q96MZ0 367 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 NLGN1Q8N2Q7 840 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 GPKOWQ92917 476 aaPredicted RBP eCLIP21.04■□□□□ 0.96
COL27A1-207ENST00000494090 CUEDC2Q9H467 287 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 METP08581 1390 aa21.04■□□□□ 0.96
COL27A1-207ENST00000494090 SARNPP82979 210 aaKnown RBP21.03■□□□□ 0.96
COL27A1-207ENST00000494090 CEP85LQ5SZL2 805 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 FBXO11Q86XK2 927 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 LAD1O00515 517 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 KCNK3O14649 394 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 GBP1P32455 592 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 CTNNA1P35221 906 aaKnown RBP21.03■□□□□ 0.96
COL27A1-207ENST00000494090 CERKLQ49MI3 558 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-207ENST00000494090 CACNA2D3Q8IZS8 1091 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 ATP2A3Q93084 1043 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 NRBP1Q9UHY1 535 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 TNNC2P02585 160 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 CNGA1P29973 690 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 ATG3Q9NT62 314 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 ZBTB24O43167 697 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-207ENST00000494090 NAA25Q14CX7 972 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 CCDC17Q96LX7 622 aa21.03■□□□□ 0.96
COL27A1-207ENST00000494090 LARSQ9P2J5 1176 aaKnown RBP21.03■□□□□ 0.96
COL27A1-207ENST00000494090 M0R2C6 588 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 RABGGTAQ92696 567 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 TEKT3Q9BXF9 490 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.02■□□□□ 0.96
COL27A1-207ENST00000494090 KIF22Q14807 665 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 MED4Q9NPJ6 270 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 PPANQ9NQ55 473 aaKnown RBP21.02■□□□□ 0.96
COL27A1-207ENST00000494090 COL4A3BPQ9Y5P4 624 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 KRIT1O00522 736 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 LIG4P49917 911 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 SLC12A2P55011 1212 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 SDCCAG8Q86SQ7 713 aaPredicted RBP21.02■□□□□ 0.96
COL27A1-207ENST00000494090 PTCH1Q13635 1447 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 TESPA1A2RU30 521 aaPredicted RBP21.02■□□□□ 0.96
COL27A1-207ENST00000494090 TRIM37O94972 964 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 GUCY2FP51841 1108 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 CCDC62Q6P9F0 684 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 PDZD4Q76G19 769 aaPredicted RBP21.02■□□□□ 0.96
COL27A1-207ENST00000494090 DDX25Q9UHL0 483 aaKnown RBP21.02■□□□□ 0.96
COL27A1-207ENST00000494090 EFCAB6Q5THR3 1501 aa21.02■□□□□ 0.96
COL27A1-207ENST00000494090 YARSP54577 528 aaKnown RBP21.02■□□□□ 0.95
COL27A1-207ENST00000494090 SLC17A8Q8NDX2 589 aa21.02■□□□□ 0.95
COL27A1-207ENST00000494090 TACC3Q9Y6A5 838 aa21.02■□□□□ 0.95
COL27A1-207ENST00000494090 PLEKHG1Q9ULL1 1385 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 ICA1Q05084 483 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 HADHQ16836 314 aaKnown RBP21.01■□□□□ 0.95
COL27A1-207ENST00000494090 PRR16Q569H4 304 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 FRMPD2Q68DX3 1309 aaPredicted RBP21.01■□□□□ 0.95
COL27A1-207ENST00000494090 USP6P35125 1406 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
COL27A1-207ENST00000494090 RGS16O15492 202 aaPredicted RBP21.01■□□□□ 0.95
COL27A1-207ENST00000494090 KRT15P19012 456 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms