RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 GMCL1Q96IK5 515 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 XPNPEP3Q9NQH7 507 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 TOMM22Q9NS69 142 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 RANBP6O60518 1105 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 SNAI1O95863 264 aaPredicted RBP15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 MFAP1P55081 439 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 CHST13Q8NET6 341 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 LRCH3Q96II8 777 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 AGBL1Q96MI9 1066 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 ATP11BQ9Y2G3 1177 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 DDX49Q9Y6V7 483 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 ASTN1O14525 1302 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 ZMYM6O95789 1325 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 NEDD4P46934 1319 aa15.84■□□□□ 0.13
CTDSP1-212ENST00000494067 RTP1P59025 263 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 MDM2Q00987 491 aaPredicted RBP15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 LRRC41Q15345 812 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 RRP12Q5JTH9 1297 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 TTBK2Q6IQ55 1244 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 RCSD1Q6JBY9 416 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 SLC39A5Q6ZMH5 540 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 HOMER2Q9NSB8 354 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 FAM184BQ9ULE4 1060 aa15.83■□□□□ 0.12
CTDSP1-212ENST00000494067 PGK1P00558 417 aa15.82■□□□□ 0.12
CTDSP1-212ENST00000494067 GSPT1P15170 499 aaKnown RBP15.82■□□□□ 0.12
CTDSP1-212ENST00000494067 ADCYAP1R1P41586 468 aa15.82■□□□□ 0.12
CTDSP1-212ENST00000494067 CNTN2Q02246 1040 aa15.82■□□□□ 0.12
CTDSP1-212ENST00000494067 MAMDC4Q6UXC1 1216 aa15.82■□□□□ 0.12
CTDSP1-212ENST00000494067 ZNF467Q7Z7K2 595 aaPredicted RBP15.82■□□□□ 0.12
CTDSP1-212ENST00000494067 SYNGAP1Q96PV0 1343 aa15.82■□□□□ 0.12
CTDSP1-212ENST00000494067 MYADML2A6NDP7 307 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 PTGS1P23219 599 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 TKFCQ3LXA3 575 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 LRIT3Q3SXY7 679 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 MUM1L1Q5H9M0 696 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 CWC27Q6UX04 472 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 TMEM47Q9BQJ4 181 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 KATNBL1Q9H079 304 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 PRDM5Q9NQX1 630 aaPredicted RBP15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 ZHX1Q9UKY1 873 aaPredicted RBP15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 PRR12Q9ULL5 1215 aa15.81■□□□□ 0.12
CTDSP1-212ENST00000494067 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 SOWAHBA6NEL2 793 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 PLA2G6O60733 806 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 ADAMTS4O75173 837 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 SLC16A2P36021 539 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 SNX17Q15036 470 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 GPR153Q6NV75 609 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 CCDC174Q6PII3 467 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 PURBQ96QR8 312 aaKnown RBP15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 ACAD9Q9H845 621 aa15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 A1CFQ9NQ94 594 aaKnown RBP15.8■□□□□ 0.12
CTDSP1-212ENST00000494067 SYNRGQ9UMZ2 1314 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 PCP11498 1178 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 CCDC96Q2M329 555 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 TRIM60Q495X7 471 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 AKNAD1Q5T1N1 836 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 C1orf53Q5VUE5 145 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 FAM133AQ8N9E0 248 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 ZKSCAN3Q9BRR0 538 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 TSEN34Q9BSV6 310 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 ABHD16BQ9H3Z7 469 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 RNF41Q9H4P4 317 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 RNF146Q9NTX7 359 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 TCP11L1Q9NUJ3 509 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
CTDSP1-212ENST00000494067 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 PDHBP11177 359 aa15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 ACVR2BQ13705 512 aa15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 TMEM63BQ5T3F8 832 aa15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 CCSAPQ6IQ19 270 aaPredicted RBP15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 MFSD6Q6ZSS7 791 aa15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 DCAF4Q8WV16 495 aa15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 RANBP17Q9H2T7 1088 aaKnown RBP15.78■□□□□ 0.12
CTDSP1-212ENST00000494067 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 MOXD2PA6NHM9 499 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 HIP1O00291 1037 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 CTAGE5O15320 804 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 DUSP11O75319 330 aaKnown RBP15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 ALAS1P13196 640 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 ITGB8P26012 769 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 BTNL9Q6UXG8 535 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 ARMCX2Q7L311 632 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 CCDC144CPQ8IYA2 1237 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 PCSK9Q8NBP7 692 aaKnown RBP15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 KLHDC9Q8NEP7 349 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 CPVLQ9H3G5 476 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 GPCPD1Q9NPB8 672 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 STARD7Q9NQZ5 370 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 DIAPH3Q9NSV4 1193 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms