RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CPVLQ9H3G5 476 aa14.89□□□□□ -0.03
HSPG2-212ENST00000493940 GPCPD1Q9NPB8 672 aa14.89□□□□□ -0.03
HSPG2-212ENST00000493940 HOMER2Q9NSB8 354 aa14.89□□□□□ -0.03
HSPG2-212ENST00000493940 ZSWIM5Q9P217 1185 aa14.89□□□□□ -0.03
HSPG2-212ENST00000493940 ISY1Q9ULR0 285 aaKnown RBP14.89□□□□□ -0.03
HSPG2-212ENST00000493940 DIS3Q9Y2L1 958 aaKnown RBP14.89□□□□□ -0.03
HSPG2-212ENST00000493940 LAMA2P24043 3122 aaKnown RBP14.89□□□□□ -0.03
HSPG2-212ENST00000493940 ADCY6O43306 1168 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 KDM4AO75164 1064 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 PDHBP11177 359 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 SYN1P17600 705 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 BTNL9Q6UXG8 535 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 FAM160B2Q86V87 743 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 C7orf61Q8IZ16 206 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 CHURC1Q8WUH1 139 aa14.88□□□□□ -0.03
HSPG2-212ENST00000493940 PURBQ96QR8 312 aaKnown RBP14.88□□□□□ -0.03
HSPG2-212ENST00000493940 ZMYND8Q9ULU4 1186 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-212ENST00000493940 SOWAHBA6NEL2 793 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 HIP1O00291 1037 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 SEPT4O43236 478 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 PTGS1P23219 599 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 OAZ1P54368 228 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
HSPG2-212ENST00000493940 IKQ13123 557 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-212ENST00000493940 COL9A3Q14050 684 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-212ENST00000493940 CYB5R4Q7L1T6 521 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 DCAF4Q8WV16 495 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 DDX11Q96FC9 970 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 SENP6Q9GZR1 1112 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-212ENST00000493940 A1CFQ9NQ94 594 aaKnown RBP14.87□□□□□ -0.03
HSPG2-212ENST00000493940 LTBP2Q14767 1821 aa14.87□□□□□ -0.03
HSPG2-212ENST00000493940 GOLGA8HP0CJ92 632 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 SNHG28P0DPA3 235 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 ALAS1P13196 640 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 LRRC41Q15345 812 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 CCDC96Q2M329 555 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 MAMDC4Q6UXC1 1216 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 FAM133AQ8N9E0 248 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 CHST13Q8NET6 341 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 TRERF1Q96PN7 1200 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 KATNBL1Q9H079 304 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 RANBP17Q9H2T7 1088 aaKnown RBP14.86□□□□□ -0.03
HSPG2-212ENST00000493940 RNF146Q9NTX7 359 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 SLC5A4Q9NY91 659 aa14.86□□□□□ -0.03
HSPG2-212ENST00000493940 PGK1P00558 417 aa14.85□□□□□ -0.03
HSPG2-212ENST00000493940 COPB2P35606 906 aa14.85□□□□□ -0.03
HSPG2-212ENST00000493940 ATN1P54259 1190 aaPredicted RBP14.85□□□□□ -0.03
HSPG2-212ENST00000493940 ZNF543Q08ER8 600 aa14.85□□□□□ -0.03
HSPG2-212ENST00000493940 TMEM63BQ5T3F8 832 aa14.85□□□□□ -0.03
HSPG2-212ENST00000493940 ANKRD35Q8N283 1001 aa14.85□□□□□ -0.03
HSPG2-212ENST00000493940 ENAHQ8N8S7 591 aaPredicted RBP14.85□□□□□ -0.03
HSPG2-212ENST00000493940 TTC14Q96N46 770 aa14.85□□□□□ -0.03
HSPG2-212ENST00000493940 SENP2Q9HC62 589 aa14.85□□□□□ -0.03
HSPG2-212ENST00000493940 CTDP1Q9Y5B0 961 aaPredicted RBP14.85□□□□□ -0.03
HSPG2-212ENST00000493940 A0A0C4DFX4 3053 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 MYADML2A6NDP7 307 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 DNM1LO00429 736 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 CYP21A2P08686 494 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 PCP11498 1178 aaKnown RBP14.84□□□□□ -0.03
HSPG2-212ENST00000493940 SYDE2Q5VT97 1194 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 STOX1Q6ZVD7 989 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 ANKS1AQ92625 1134 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 ESR2Q92731 530 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 UBA5Q9GZZ9 404 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 RNF41Q9H4P4 317 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-212ENST00000493940 ACAD9Q9H845 621 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 MYH7BA7E2Y1 1941 aa14.84□□□□□ -0.03
HSPG2-212ENST00000493940 SOX1O00570 391 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-212ENST00000493940 NFIBO00712 420 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 SGSM2O43147 1006 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 MSCO60682 206 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 ADAMTS4O75173 837 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-212ENST00000493940 FDX1P10109 184 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 ADCYAP1R1P41586 468 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 SEC23AQ15436 765 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 IMMTQ16891 758 aaKnown RBP14.83□□□□□ -0.04
HSPG2-212ENST00000493940 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-212ENST00000493940 DGKHQ86XP1 1220 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 CCDC144CPQ8IYA2 1237 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 SLC17A8Q8NDX2 589 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 CLEC4DQ8WXI8 215 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 ZSCAN10Q96SZ4 725 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-212ENST00000493940 GDF15Q99988 308 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-212ENST00000493940 CYP39A1Q9NYL5 469 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 KIAA1217Q5T5P2 1943 aa14.83□□□□□ -0.04
HSPG2-212ENST00000493940 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-212ENST00000493940 ICAM1P05362 532 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 BMP8BP34820 402 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 ACVR2BQ13705 512 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 SLC35G1Q2M3R5 365 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 SLC39A5Q6ZMH5 540 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 ARMCX2Q7L311 632 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 STAG2Q8N3U4 1231 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 PNMA1Q8ND90 353 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 TBC1D5Q92609 795 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 XPNPEP3Q9NQH7 507 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms