RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 CSB-PGBD3P0DP91 1061 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 EPB41P11171 864 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 XBP1P17861 261 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 HPDP32754 393 aaPredicted RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 PKN1Q16512 942 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 IL17AQ16552 155 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CCDC40Q4G0X9 1142 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CFAP58Q5T655 872 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 HAUS3Q68CZ6 603 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 EMBQ6PCB8 327 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CCDC13Q8IYE1 715 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 HELBQ8NG08 1087 aaPredicted RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 KRT23Q9C075 422 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 CNNM1Q9NRU3 951 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 MAGEC2Q9UBF1 373 aaPredicted RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 MYH10P35580 1976 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 SIPA1L3O60292 1781 aaPredicted RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 ARFGEF2Q9Y6D5 1785 aa9.31□□□□□ -0.92
GBP3-208ENST00000493594 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
GBP3-208ENST00000493594 A0A1W2PQC6 194 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 NUTM2BA6NNL0 878 aaPredicted RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 MINDY4BA8MYZ0 360 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 NUTM2EB1AL46 878 aaPredicted RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 TACC1O75410 805 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 GLI1P08151 1106 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 VAV2P52735 878 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 NEDD9Q14511 834 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 MEA1Q16626 185 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 KCTD19Q17RG1 926 aaPredicted RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 MICALCLQ6ZW33 695 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 NLRP14Q86W24 1093 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 KIRREL3Q8IZU9 778 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 TRIM58Q8NG06 486 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 RASSF8Q8NHQ8 419 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 TUBGCP2Q9BSJ2 902 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 UBAC1Q9BSL1 405 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 CNNM2Q9H8M5 875 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 SLC4A4Q9Y6R1 1079 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 TCRBV5S4A2TA0A5A2 114 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 GSG1L2A8MUP6 293 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 SNAP23O00161 211 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 KIF1CO43896 1103 aaKnown RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 ATP2C2O75185 946 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 PPP1R37O75864 691 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 PLEKHA8P1O95397 391 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 NR1D1P20393 614 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 ELF1P32519 619 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 NF2P35240 595 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 DNM2P50570 870 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 CDR1P51861 262 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 GUCY2DQ02846 1103 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 TRADDQ15628 312 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 PTGISQ16647 500 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 CEP85LQ5SZL2 805 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 PIK3AP1Q6ZUJ8 805 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 ADSSL1Q8N142 457 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 FNBP4Q8N3X1 1017 aaPredicted RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 DCAF5Q96JK2 942 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 CCDC114Q96M63 670 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 IFIH1Q9BYX4 1025 aaKnown RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 EPB41L5Q9HCM4 733 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 EXOC1Q9NV70 894 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 ODF2LQ9ULJ1 636 aa9.3□□□□□ -0.92
GBP3-208ENST00000493594 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.3□□□□□ -0.92
GBP3-208ENST00000493594 SPEF2Q9C093 1822 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 FRMD3A2A2Y4 597 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 BACH1O14867 736 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 BUB1O43683 1085 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 USO1O60763 962 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 PDHBP11177 359 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 STAT6P42226 847 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 PAFAH1B1P43034 410 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 E2F5Q15329 346 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 MIGA1Q8NAN2 632 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 MYCBPAPQ8TBZ2 947 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 SCLT1Q96NL6 688 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 VCPKMTQ9H867 229 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 SLC40A1Q9NP59 571 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 RMND1Q9NWS8 449 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 PCDHA13Q9Y5I0 950 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 PDS5AQ29RF7 1337 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 A6NNZ2 444 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 ADAMTS3O15072 1205 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 SRGNP10124 158 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 ERCC3P19447 782 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 EEF1GP26641 437 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 MDH1P40925 334 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 SMTNP53814 917 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 ZBED6P86452 979 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 ATP2C1P98194 919 aaPredicted RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 TUBB8Q3ZCM7 444 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 KDM7AQ6ZMT4 941 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms