RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 CEP131Q9UPN4 1083 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 APOBEC2Q9Y235 224 aaKnown RBP6.06□□□□□ -1.44
VPS13A-212ENST00000493341 LUC7L2Q9Y383 392 aaKnown RBP6.06□□□□□ -1.44
VPS13A-212ENST00000493341 ZNF891A8MT65 544 aaPredicted RBP6.06□□□□□ -1.44
VPS13A-212ENST00000493341 FBXO21O94952 628 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 ADH5P11766 374 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 BPIP17213 487 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 PDE6BP35913 854 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 ASPAP45381 313 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 RNF4P78317 190 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 ABCB5Q2M3G0 1257 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 GFOD2Q3B7J2 385 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 NXNQ6DKJ4 435 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 KCNT2Q6UVM3 1135 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 ARMCX6Q7L4S7 300 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 MTDHQ86UE4 582 aaKnown RBP6.06□□□□□ -1.44
VPS13A-212ENST00000493341 SMYD4Q8IYR2 804 aaPredicted RBP6.06□□□□□ -1.44
VPS13A-212ENST00000493341 MAGEB6Q8N7X4 407 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 MFSD2AQ8NA29 543 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 C12orf50Q8NA57 414 aaPredicted RBP6.06□□□□□ -1.44
VPS13A-212ENST00000493341 RHOBTB2Q9BYZ6 727 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 CYP4F12Q9HCS2 524 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 PCDHA8Q9Y5H6 950 aa6.06□□□□□ -1.44
VPS13A-212ENST00000493341 A0A087WZG4 1122 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 AQP7O14520 342 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 CCND1P24385 295 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 DPY19L1Q2PZI1 675 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 NBPF9Q3BBW0 867 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 ABHD17CQ6PCB6 329 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 C1orf229Q6ZS94 237 aaPredicted RBP6.05□□□□□ -1.44
VPS13A-212ENST00000493341 CHSY3Q70JA7 882 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 DDX53Q86TM3 631 aaKnown RBP6.05□□□□□ -1.44
VPS13A-212ENST00000493341 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 VWCEQ96DN2 955 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 LUC7LQ9NQ29 371 aaKnown RBP6.05□□□□□ -1.44
VPS13A-212ENST00000493341 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
VPS13A-212ENST00000493341 SPEF1Q9Y4P9 236 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 FHOD1Q9Y613 1164 aa6.05□□□□□ -1.44
VPS13A-212ENST00000493341 C11orf95C9JLR9 678 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-212ENST00000493341 PRKD3O94806 890 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 LRIG2O94898 1065 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 CPP00450 1065 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 SOX4Q06945 474 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-212ENST00000493341 GRB10Q13322 594 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 STYK1Q6J9G0 422 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 APBB1IPQ7Z5R6 666 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-212ENST00000493341 TPH2Q8IWU9 490 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 SAMD3Q8N6K7 520 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 GPR161Q8N6U8 529 aaKnown RBP6.04□□□□□ -1.44
VPS13A-212ENST00000493341 GALNT6Q8NCL4 622 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 C1orf159Q96HA4 380 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 GPR101Q96P66 508 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-212ENST00000493341 CYP26B1Q9NR63 512 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 VSTM5A8MXK1 200 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 GAS7O60861 476 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 ABLIM3O94929 683 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 FKBP9O95302 570 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 WISP1O95388 367 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 MYBL2P10244 700 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 ADCYAP1R1P41586 468 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 AMPD2Q01433 879 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 SNW1Q13573 536 aaKnown RBP6.04□□□□□ -1.44
VPS13A-212ENST00000493341 SLC35F1Q5T1Q4 408 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 LETMD1Q6P1Q0 360 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 FKBP9P1Q75LS8 142 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 SYTL5Q8TDW5 730 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-212ENST00000493341 DCAF4Q8WV16 495 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 MIPEPQ99797 713 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 DSCC1Q9BVC3 393 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 PRDM14Q9GZV8 571 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 FAM105AQ9NUU6 356 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 GFOD1Q9NXC2 390 aa6.04□□□□□ -1.44
VPS13A-212ENST00000493341 RFPL1O75677 317 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 GLRX3O76003 335 aaKnown RBP6.03□□□□□ -1.44
VPS13A-212ENST00000493341 F2P00734 622 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 ATP13A4Q4VNC1 1196 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 DENND5AQ6IQ26 1287 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 ACAD11Q709F0 780 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 ANKLE2Q86XL3 938 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 DGKHQ86XP1 1220 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 ZC3H7AQ8IWR0 971 aaKnown RBP6.03□□□□□ -1.44
VPS13A-212ENST00000493341 IGSF22Q8N9C0 903 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 DNAJB8Q8NHS0 232 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 EDARADDQ8WWZ3 215 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 SLC39A13Q96H72 371 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 CAMKK2Q96RR4 588 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 RNF208Q9H0X6 261 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 ZKSCAN5Q9Y2L8 839 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 KRBA1A5PL33 1030 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 MEIS1O00470 390 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 SNUPNO95149 360 aaKnown RBP6.03□□□□□ -1.44
VPS13A-212ENST00000493341 SCG5P05408 212 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 KCNA6P17658 529 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 AMPD1P23109 780 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 IARSP41252 1262 aaKnown RBP6.03□□□□□ -1.44
VPS13A-212ENST00000493341 SCRN1Q12765 414 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 TRAPPC3LQ5T215 181 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 HDGFL2Q7Z4V5 671 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-212ENST00000493341 SMC1BQ8NDV3 1235 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 EVI5LQ96CN4 794 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms