RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 ACAD9Q9H845 621 aa24.27■■□□□ 1.48
CLTA-208ENST00000493185 TCP11L1Q9NUJ3 509 aa24.27■■□□□ 1.48
CLTA-208ENST00000493185 TOP1P11387 765 aaKnown RBP24.26■■□□□ 1.47
CLTA-208ENST00000493185 RTP1P59025 263 aa24.26■■□□□ 1.47
CLTA-208ENST00000493185 TKFCQ3LXA3 575 aa24.26■■□□□ 1.47
CLTA-208ENST00000493185 AKNAD1Q5T1N1 836 aa24.26■■□□□ 1.47
CLTA-208ENST00000493185 CWC27Q6UX04 472 aaKnown RBP24.26■■□□□ 1.47
CLTA-208ENST00000493185 RNF180Q86T96 592 aa24.26■■□□□ 1.47
CLTA-208ENST00000493185 RNF41Q9H4P4 317 aaPredicted RBP24.26■■□□□ 1.47
CLTA-208ENST00000493185 PRR12Q9ULL5 1215 aa24.26■■□□□ 1.47
CLTA-208ENST00000493185 MCM3APO60318 1980 aa24.25■■□□□ 1.47
CLTA-208ENST00000493185 ADCYAP1R1P41586 468 aa24.25■■□□□ 1.47
CLTA-208ENST00000493185 SLC39A5Q6ZMH5 540 aa24.25■■□□□ 1.47
CLTA-208ENST00000493185 AGBL1Q96MI9 1066 aa24.25■■□□□ 1.47
CLTA-208ENST00000493185 UBE2OQ9C0C9 1292 aaKnown RBP24.25■■□□□ 1.47
CLTA-208ENST00000493185 RNF146Q9NTX7 359 aa24.25■■□□□ 1.47
CLTA-208ENST00000493185 PRKAG2Q9UGJ0 569 aa24.25■■□□□ 1.47
CLTA-208ENST00000493185 ZHX1Q9UKY1 873 aaPredicted RBP24.25■■□□□ 1.47
CLTA-208ENST00000493185 SNAI1O95863 264 aaPredicted RBP24.24■■□□□ 1.47
CLTA-208ENST00000493185 PGK1P00558 417 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 CCDC174Q6PII3 467 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 RASGRP2Q7LDG7 609 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 TMEM47Q9BQJ4 181 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 FAM184BQ9ULE4 1060 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 ATP11BQ9Y2G3 1177 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 ZNF536O15090 1300 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 LAMA4Q16363 1823 aa24.24■■□□□ 1.47
CLTA-208ENST00000493185 ZNF213O14771 459 aa24.23■■□□□ 1.47
CLTA-208ENST00000493185 ALAS1P13196 640 aa24.23■■□□□ 1.47
CLTA-208ENST00000493185 TBC1D10CQ8IV04 446 aa24.23■■□□□ 1.47
CLTA-208ENST00000493185 FERMT2Q96AC1 680 aa24.23■■□□□ 1.47
CLTA-208ENST00000493185 TRERF1Q96PN7 1200 aa24.23■■□□□ 1.47
CLTA-208ENST00000493185 LBHD1Q9BQE6 289 aaPredicted RBP24.23■■□□□ 1.47
CLTA-208ENST00000493185 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.23■■□□□ 1.47
CLTA-208ENST00000493185 POTEB2H3BUK9 544 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 SNAP25P60880 206 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 MDM2Q00987 491 aaPredicted RBP24.22■■□□□ 1.47
CLTA-208ENST00000493185 ACVR2BQ13705 512 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 TDHQ8IZJ6 230 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 ESR2Q92731 530 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 TTC14Q96N46 770 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 ABHD16BQ9H3Z7 469 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 PHF24Q9UPV7 400 aa24.22■■□□□ 1.47
CLTA-208ENST00000493185 NT5C2P49902 561 aa24.21■■□□□ 1.47
CLTA-208ENST00000493185 SNX17Q15036 470 aa24.21■■□□□ 1.47
CLTA-208ENST00000493185 ARMCX2Q7L311 632 aa24.21■■□□□ 1.47
CLTA-208ENST00000493185 LENG1Q96BZ8 264 aaPredicted RBP24.21■■□□□ 1.47
CLTA-208ENST00000493185 FGD4Q96M96 766 aa24.21■■□□□ 1.47
CLTA-208ENST00000493185 A1CFQ9NQ94 594 aaKnown RBP24.21■■□□□ 1.47
CLTA-208ENST00000493185 CCPG1Q9ULG6 757 aa24.21■■□□□ 1.47
CLTA-208ENST00000493185 FRMPD2Q68DX3 1309 aaPredicted RBP24.2■■□□□ 1.46
CLTA-208ENST00000493185 SZT2Q5T011 3432 aa24.2■■□□□ 1.46
CLTA-208ENST00000493185 CNTN2Q02246 1040 aa24.2■■□□□ 1.46
CLTA-208ENST00000493185 TRIM60Q495X7 471 aa24.2■■□□□ 1.46
CLTA-208ENST00000493185 SYDE2Q5VT97 1194 aa24.2■■□□□ 1.46
CLTA-208ENST00000493185 TTBK2Q6IQ55 1244 aa24.2■■□□□ 1.46
CLTA-208ENST00000493185 BTNL9Q6UXG8 535 aa24.2■■□□□ 1.46
CLTA-208ENST00000493185 FAM133AQ8N9E0 248 aa24.2■■□□□ 1.46
CLTA-208ENST00000493185 NEDD4P46934 1319 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 SYNRGQ9UMZ2 1314 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 ADAMTS4O75173 837 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 DUSP11O75319 330 aaKnown RBP24.19■■□□□ 1.46
CLTA-208ENST00000493185 ICAM1P05362 532 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 PDHBP11177 359 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 SLC16A2P36021 539 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 C1orf53Q5VUE5 145 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 CCDC144CPQ8IYA2 1237 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 TSEN34Q9BSV6 310 aaKnown RBP24.19■■□□□ 1.46
CLTA-208ENST00000493185 DSCC1Q9BVC3 393 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 RANBP17Q9H2T7 1088 aaKnown RBP24.19■■□□□ 1.46
CLTA-208ENST00000493185 GPCPD1Q9NPB8 672 aa24.19■■□□□ 1.46
CLTA-208ENST00000493185 LAMA3Q16787 3333 aa24.18■■□□□ 1.46
CLTA-208ENST00000493185 SOX1O00570 391 aaPredicted RBP24.18■■□□□ 1.46
CLTA-208ENST00000493185 IQCA1Q86XH1 822 aa24.18■■□□□ 1.46
CLTA-208ENST00000493185 SPC25Q9HBM1 224 aa24.18■■□□□ 1.46
CLTA-208ENST00000493185 PRDM5Q9NQX1 630 aaPredicted RBP24.18■■□□□ 1.46
CLTA-208ENST00000493185 CTNNA3Q9UI47 895 aa24.18■■□□□ 1.46
CLTA-208ENST00000493185 ASB14A6NK59 587 aa24.17■■□□□ 1.46
CLTA-208ENST00000493185 IRX6P78412 446 aaPredicted RBP24.17■■□□□ 1.46
CLTA-208ENST00000493185 IMMTQ16891 758 aaKnown RBP24.17■■□□□ 1.46
CLTA-208ENST00000493185 CCDC144BQ3MJ40 725 aa24.17■■□□□ 1.46
CLTA-208ENST00000493185 CCDC178Q5BJE1 867 aa24.17■■□□□ 1.46
CLTA-208ENST00000493185 MUM1L1Q5H9M0 696 aa24.17■■□□□ 1.46
CLTA-208ENST00000493185 LRCH3Q96II8 777 aa24.17■■□□□ 1.46
CLTA-208ENST00000493185 LTBP2Q14767 1821 aa24.17■■□□□ 1.46
CLTA-208ENST00000493185 A0A1W2PQ45 241 aaPredicted RBP24.16■■□□□ 1.46
CLTA-208ENST00000493185 A0A1W2PQY0 241 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 PDE4AP27815 886 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 ZNF543Q08ER8 600 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 LRIT3Q3SXY7 679 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 TTC22Q5TAA0 569 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 NSMFQ6X4W1 530 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 KLHDC9Q8NEP7 349 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 NUP133Q8WUM0 1156 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 ZKSCAN3Q9BRR0 538 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 CYP39A1Q9NYL5 469 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 PNMA2Q9UL42 364 aa24.16■■□□□ 1.46
CLTA-208ENST00000493185 SOWAHBA6NEL2 793 aa24.15■■□□□ 1.46
CLTA-208ENST00000493185 MOXD2PA6NHM9 499 aa24.15■■□□□ 1.46
CLTA-208ENST00000493185 KDM4AO75164 1064 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms