RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	CLCN6	P51797	869 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	IRX3	P78415	501 aa	Predicted RBP	11.27	□□□□□ -0.61
TRO-223	ENST00000492142	KIF23	Q02241	960 aa	Predicted RBP	11.27	□□□□□ -0.61
TRO-223	ENST00000492142	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
TRO-223	ENST00000492142	PKN1	Q16512	942 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	CDC37	Q16543	378 aa	Predicted RBP	11.27	□□□□□ -0.61
TRO-223	ENST00000492142	QRICH1	Q2TAL8	776 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	CCDC174	Q6PII3	467 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	FAM43A	Q8N2R8	423 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	ATG4C	Q96DT6	458 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	CAPNS2	Q96L46	248 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	ZIC5	Q96T25	663 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	PTPN18	Q99952	460 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.27	□□□□□ -0.61
TRO-223	ENST00000492142	HOXC10	Q9NYD6	342 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	PPP1R9A	Q9ULJ8	1098 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	STK36	Q9NRP7	1315 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	MYH6	P13533	1939 aa		11.27	□□□□□ -0.61
TRO-223	ENST00000492142	ZBTB5	O15062	677 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	AOC2	O75106	756 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	SCG2	P13521	617 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	MNX1	P50219	401 aa	Predicted RBP	11.26	□□□□□ -0.61
TRO-223	ENST00000492142	PFKFB3	Q16875	520 aa	Predicted RBP	11.26	□□□□□ -0.61
TRO-223	ENST00000492142	LARP1B	Q659C4	914 aa	Known RBP	11.26	□□□□□ -0.61
TRO-223	ENST00000492142	OTUD7B	Q6GQQ9	843 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	HEATR3	Q7Z4Q2	680 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	ANKRD23	Q86SG2	305 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	WASF1	Q92558	559 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.26	□□□□□ -0.61
TRO-223	ENST00000492142	COA7	Q96BR5	231 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	MTMR8	Q96EF0	704 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	CWC22	Q9HCG8	908 aa	Known RBP	11.26	□□□□□ -0.61
TRO-223	ENST00000492142	GJB4	Q9NTQ9	266 aa		11.26	□□□□□ -0.61
TRO-223	ENST00000492142	RBM27	Q9P2N5	1060 aa	Known RBP	11.26	□□□□□ -0.61
TRO-223	ENST00000492142	TESPA1	A2RU30	521 aa	Predicted RBP	11.25	□□□□□ -0.61
TRO-223	ENST00000492142	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.25	□□□□□ -0.61
TRO-223	ENST00000492142	VWA5A	O00534	786 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	PEX10	O60683	326 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	PPP1R11	O60927	126 aa	Predicted RBP	11.25	□□□□□ -0.61
TRO-223	ENST00000492142	CYP2C8	P10632	490 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	TAL1	P17542	331 aa	Predicted RBP	11.25	□□□□□ -0.61
TRO-223	ENST00000492142	GUCY1B3	Q02153	619 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	WWC2	Q6AWC2	1192 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	FBXO11	Q86XK2	927 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	CPXCR1	Q8N123	301 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	RANBP17	Q9H2T7	1088 aa	Known RBP	11.25	□□□□□ -0.61
TRO-223	ENST00000492142	RAVER2	Q9HCJ3	691 aa	Known RBP	11.25	□□□□□ -0.61
TRO-223	ENST00000492142	VPS54	Q9P1Q0	977 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	KIF3A	Q9Y496	699 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	LOC285556	D6RIA3	1793 aa		11.25	□□□□□ -0.61
TRO-223	ENST00000492142	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
TRO-223	ENST00000492142	PDC	P20941	246 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	VEGFB	P49765	207 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	NAPA	P54920	295 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	INHBE	P58166	350 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	C1QTNF8	P60827	252 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	HERVK_113	P62684	666 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	SREBF2	Q12772	1141 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	NOG	Q13253	232 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	TRIM29	Q14134	588 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	PLS1	Q14651	629 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	USH1G	Q495M9	461 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	IFNL1	Q8IU54	200 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	C8orf76	Q96K31	380 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	AGBL1	Q96MI9	1066 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	PAGR1	Q9BTK6	254 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	AMN	Q9BXJ7	453 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	SLC38A10	Q9HBR0	1119 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	PNMA3	Q9UL41	463 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	ADAMTS5	Q9UNA0	930 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	KCNJ14	Q9UNX9	436 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	SLC45A1	Q9Y2W3	748 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	PCDHA1	Q9Y5I3	950 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	RLF	Q13129	1914 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	WDR33	Q9C0J8	1336 aa	Known RBP	11.24	□□□□□ -0.61
TRO-223	ENST00000492142	SMCHD1	A6NHR9	2005 aa		11.24	□□□□□ -0.61
TRO-223	ENST00000492142	VPS37C	A5D8V6	355 aa	Predicted RBP	11.23	□□□□□ -0.61
TRO-223	ENST00000492142		H3BQV1	296 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	STXBP3	O00186	592 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	ICAM1	P05362	532 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	FDX1	P10109	184 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	XBP1	P17861	261 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	SYT1	P21579	422 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	TM4SF4	P48230	202 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	TMEM132B	Q14DG7	1078 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	IFFO2	Q5TF58	517 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.23	□□□□□ -0.61
TRO-223	ENST00000492142	KRT40	Q6A162	431 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	TYW1B	Q6NUM6	668 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	POTEE	Q6S8J3	1075 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	REPS2	Q8NFH8	660 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.23	□□□□□ -0.61
TRO-223	ENST00000492142	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.23	□□□□□ -0.61
TRO-223	ENST00000492142	SHISA4	Q96DD7	197 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	BARHL2	Q9NY43	387 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	BTBD7	Q9P203	1132 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	RBPJL	Q9UBG7	517 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	CCPG1	Q9ULG6	757 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	ZNF536	O15090	1300 aa		11.23	□□□□□ -0.61
TRO-223	ENST00000492142	MYPN	Q86TC9	1320 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms