RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 SPZ1Q9BXG8 430 aa12.4□□□□□ -0.43
ATF3-209ENST00000492118 MTMR6Q9Y217 621 aa12.4□□□□□ -0.43
ATF3-209ENST00000492118 KIF3AQ9Y496 699 aa12.4□□□□□ -0.43
ATF3-209ENST00000492118 PDCP20941 246 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 PLS1Q14651 629 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 RASGRP4Q8TDF6 673 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 OXER1Q8TDS5 423 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 LPAR1Q92633 364 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 SGSM3Q96HU1 749 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 RIOX1Q9H6W3 641 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 TRPM7Q96QT4 1865 aa12.39□□□□□ -0.43
ATF3-209ENST00000492118 PASKQ96RG2 1323 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 C19orf81C9J6K1 198 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 WDR46O15213 610 aaKnown RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 RRP9O43818 475 aaKnown RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 ZSCAN22P10073 491 aaPredicted RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 ATP2B1P20020 1258 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 NAPAP54920 295 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 NLRP5P59047 1200 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 CEBPZQ03701 1054 aaKnown RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 NR5A1Q13285 461 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 PPIL2Q13356 520 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 PFKFB3Q16875 520 aaPredicted RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 FBXO18Q8NFZ0 1043 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 TNPO1Q92973 898 aaKnown RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 ATG4CQ96DT6 458 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 SLF1Q9BQI6 1058 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 PTPRFP10586 1907 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 BTBD18B2RXH4 712 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 ZBTB5O15062 677 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 CHURC1Q8WUH1 139 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 WASF1Q92558 559 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 CTDP1Q9Y5B0 961 aaPredicted RBP12.38□□□□□ -0.43
ATF3-209ENST00000492118 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
ATF3-209ENST00000492118 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
ATF3-209ENST00000492118 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 PNMA6FA0A0J9YX94 578 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 BRD1O95696 1058 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 FKBP1BP68106 108 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 SNAPC2Q13487 334 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
ATF3-209ENST00000492118 FEM1BQ9UK73 627 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 CCL15-CCL14A0A0B4J2E2 113 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
ATF3-209ENST00000492118 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 STXBP3O00186 592 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 CYP2C8P10632 490 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 NUCB2P80303 420 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 CCL15Q16663 113 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
ATF3-209ENST00000492118 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
ATF3-209ENST00000492118 PGBD1Q96JS3 809 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 ZIC5Q96T25 663 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 PAGR1Q9BTK6 254 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
ATF3-209ENST00000492118 TMEM88BA6NKF7 163 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 F13A1P00488 732 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 XBP1P17861 261 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 IRX3P78415 501 aaPredicted RBP12.36□□□□□ -0.43
ATF3-209ENST00000492118 UBE2SQ16763 222 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 CYP4F22Q6NT55 531 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 FBXO11Q86XK2 927 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 DIS3L2Q8IYB7 885 aaKnown RBP12.36□□□□□ -0.43
ATF3-209ENST00000492118 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATF3-209ENST00000492118 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
ATF3-209ENST00000492118 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
ATF3-209ENST00000492118 SMCO2A6NFE2 343 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 MMP1P03956 469 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 HOXA13P31271 388 aaPredicted RBP12.35□□□□□ -0.43
ATF3-209ENST00000492118 CATSPERGQ6ZRH7 1159 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 P2RX7Q99572 595 aaKnown RBP12.35□□□□□ -0.43
ATF3-209ENST00000492118 GZF1Q9H116 711 aaPredicted RBP12.35□□□□□ -0.43
ATF3-209ENST00000492118 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
ATF3-209ENST00000492118 PPP1R9AQ9ULJ8 1098 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
ATF3-209ENST00000492118 SYNPO2Q9UMS6 1093 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L11C9JVI0 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L18D6R9N7 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L22D6RA61 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L17D6RBQ6 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L19D6RCP7 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L20D6RJB6 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 VWA5AO00534 786 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 CXCL11O14625 94 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 ALAS1P13196 640 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 DNM1Q05193 864 aaKnown RBP12.35□□□□□ -0.43
ATF3-209ENST00000492118 USP17L24Q0WX57 530 aa12.35□□□□□ -0.43
ATF3-209ENST00000492118 MOGSQ13724 837 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms