RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 STX8Q9UNK0 236 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 ATP11BQ9Y2G3 1177 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
NUP50-217ENST00000491860 TACC3Q9Y6A5 838 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 LOC102724159A0A0B4J2E5 919 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 ASB14A6NK59 587 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 HIP1O00291 1037 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 DUSP11O75319 330 aaKnown RBP10.34□□□□□ -0.75
NUP50-217ENST00000491860 FGRP09769 529 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 ADCYAP1R1P41586 468 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 NOVP48745 357 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 PWP2Q15269 919 aaKnown RBP10.34□□□□□ -0.75
NUP50-217ENST00000491860 CCDC178Q5BJE1 867 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 LRRC47Q8N1G4 583 aaKnown RBP10.34□□□□□ -0.75
NUP50-217ENST00000491860 TTC14Q96N46 770 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 SEZ6LQ9BYH1 1024 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 RNF41Q9H4P4 317 aaPredicted RBP10.34□□□□□ -0.75
NUP50-217ENST00000491860 RAVER2Q9HCJ3 691 aaKnown RBP10.34□□□□□ -0.75
NUP50-217ENST00000491860 TCP11L1Q9NUJ3 509 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 RIPK3Q9Y572 518 aa10.34□□□□□ -0.75
NUP50-217ENST00000491860 TOP1P11387 765 aaKnown RBP10.33□□□□□ -0.76
NUP50-217ENST00000491860 CST5P28325 142 aaPredicted RBP10.33□□□□□ -0.76
NUP50-217ENST00000491860 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 TRIM60Q495X7 471 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 ANO1Q5XXA6 986 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 SMC5Q8IY18 1101 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 TOX2Q96NM4 488 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 MPHOSPH6Q99547 160 aaKnown RBP10.33□□□□□ -0.76
NUP50-217ENST00000491860 CDX2Q99626 313 aaPredicted RBP10.33□□□□□ -0.76
NUP50-217ENST00000491860 OSBPL3Q9H4L5 887 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 TOMM22Q9NS69 142 aa10.33□□□□□ -0.76
NUP50-217ENST00000491860 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.33□□□□□ -0.76
NUP50-217ENST00000491860 DCDC2CA8MYV0 355 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 ADAMTS4O75173 837 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 SNAI1O95863 264 aaPredicted RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 PGK1P00558 417 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 FGAP02671 866 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 CLTBP09497 229 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 HSPD1P10809 573 aaKnown RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 MCCP23508 829 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 SMAD3P84022 425 aaKnown RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 CTDSPL2Q05D32 466 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 CCDC174Q6PII3 467 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 CCDC129Q6ZRS4 1044 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 MFSD6Q6ZSS7 791 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 MAFAQ8NHW3 353 aaPredicted RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 GLT1D1Q96MS3 346 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 MAF1Q9H063 256 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 SEMA6BQ9H3T3 888 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 PRDM5Q9NQX1 630 aaPredicted RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 STARD7Q9NQZ5 370 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 RNF146Q9NTX7 359 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 ADD3Q9UEY8 706 aaKnown RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 ZHX1Q9UKY1 873 aaPredicted RBP10.32□□□□□ -0.76
NUP50-217ENST00000491860 ELP1O95163 1332 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 CCDC171Q6TFL3 1326 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 SYNRGQ9UMZ2 1314 aa10.32□□□□□ -0.76
NUP50-217ENST00000491860 TMEM265A0A087WTH1 108 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 A0A1W2PQ45 241 aaPredicted RBP10.31□□□□□ -0.76
NUP50-217ENST00000491860 A0A1W2PQY0 241 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 FOXP2O15409 715 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 ZEB2O60315 1214 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 CABYRO75952 493 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 ICAM1P05362 532 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 ACLYP53396 1101 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 GJA9P57773 515 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 CCDC96Q2M329 555 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 CCDC144BQ3MJ40 725 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 AKNAD1Q5T1N1 836 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 BTNL9Q6UXG8 535 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 ARMCX2Q7L311 632 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 ANKRD33Q7Z3H0 272 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 CHD1LQ86WJ1 897 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 FAM133AQ8N9E0 248 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 KLHDC9Q8NEP7 349 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 RILPL2Q969X0 211 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 FERMT2Q96AC1 680 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 FAM161BQ96MY7 647 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 TRERF1Q96PN7 1200 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 LNPKQ9C0E8 428 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 UPF3AQ9H1J1 476 aaKnown RBP10.31□□□□□ -0.76
NUP50-217ENST00000491860 A1CFQ9NQ94 594 aaKnown RBP10.31□□□□□ -0.76
NUP50-217ENST00000491860 PDLIM7Q9NR12 457 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 IL17RBQ9NRM6 502 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 PRR12Q9ULL5 1215 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 Q9Y3F1 56 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 MCM3APO60318 1980 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
NUP50-217ENST00000491860 MUC3AQ02505 3323 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 A0A0D9SFI3 127 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 B4DLN1 442 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 ZNF213O14771 459 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 KIAA0355O15063 1070 aa10.3□□□□□ -0.76
NUP50-217ENST00000491860 TLR3O15455 904 aaKnown RBP10.3□□□□□ -0.76
NUP50-217ENST00000491860 C6orf222P0C671 652 aaPredicted RBP10.3□□□□□ -0.76
NUP50-217ENST00000491860 ALAS1P13196 640 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms