RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 FAM107AO95990 144 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 HAUS3Q68CZ6 603 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 TTI2Q6NXR4 508 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 CCSER1Q9C0I3 900 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 KAT14Q9H8E8 782 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 CNNM2Q9H8M5 875 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 C9orf78Q9NZ63 289 aaPredicted RBP11.53□□□□□ -0.56
SREBF2-208ENST00000491541 A0A0G2JLW4 131 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 LAD1O00515 517 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 PRC1O43663 620 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 CRACR2BQ8N4Y2 399 aaPredicted RBP11.53□□□□□ -0.56
SREBF2-208ENST00000491541 CNKSR1Q969H4 720 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 CCDC8Q9H0W5 538 aaPredicted RBP11.53□□□□□ -0.56
SREBF2-208ENST00000491541 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 BATF3Q9NR55 127 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 HOMER3Q9NSC5 361 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 FAM169AQ9Y6X4 670 aa11.53□□□□□ -0.56
SREBF2-208ENST00000491541 CHUKO15111 745 aa11.52□□□□□ -0.56
SREBF2-208ENST00000491541 HADHBP55084 474 aaKnown RBP11.52□□□□□ -0.56
SREBF2-208ENST00000491541 SETQ01105 290 aaPredicted RBP11.52□□□□□ -0.56
SREBF2-208ENST00000491541 WWC2Q6AWC2 1192 aa11.52□□□□□ -0.56
SREBF2-208ENST00000491541 OLFM4Q6UX06 510 aa11.52□□□□□ -0.56
SREBF2-208ENST00000491541 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.56
SREBF2-208ENST00000491541 BANK1Q8NDB2 785 aa11.52□□□□□ -0.56
SREBF2-208ENST00000491541 DCAF5Q96JK2 942 aa11.52□□□□□ -0.56
SREBF2-208ENST00000491541 PPIP5K2O43314 1243 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 POLR3DP05423 398 aaPredicted RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 SATB1Q01826 763 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 MTF1Q14872 753 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 KRT31Q15323 416 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 GNL3LQ9NVN8 582 aaKnown RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 RPL26L1Q9UNX3 145 aaKnown RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 PLIN4Q96Q06 1357 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 POTEFA5A3E0 1075 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 PCCAP05165 728 aaPredicted RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 PIP4K2AP48426 406 aaPredicted RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 ECM1Q16610 540 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 TMTC2Q8N394 836 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 MB21D1Q8N884 522 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 MIEF2Q96C03 454 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 LZTFL1Q9NQ48 299 aa11.52□□□□□ -0.57
SREBF2-208ENST00000491541 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 FNDC1Q4ZHG4 1894 aaPredicted RBP11.52□□□□□ -0.57
SREBF2-208ENST00000491541 HMGB1P1B2RPK0 211 aaPredicted RBP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 ERVV-2B6SEH9 535 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 DEXIO95424 95 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 MYBL2P10244 700 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 CLCN2P51788 898 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 TTF1Q15361 905 aaPredicted RBP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 CCDC142Q17RM4 750 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 C1orf141Q5JVX7 400 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 PDE2AO00408 941 aaPredicted RBP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 TEX33O43247 280 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 SNRPA1P09661 255 aaKnown RBP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 VAV2P52735 878 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 NBPF9Q3BBW0 867 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 PIGWQ7Z7B1 504 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 COPB1P53618 953 aaKnown RBP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 EP400NLQ6ZTU2 488 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 CABS1Q96KC9 395 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 INPP4AQ96PE3 977 aaPredicted RBP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 TMBIM4Q9HC24 238 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 STXBP5LQ9Y2K9 1186 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.51□□□□□ -0.57
SREBF2-208ENST00000491541 ZNF263O14978 683 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 TRAPPC3O43617 180 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 ITIH4Q14624 930 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 PTGISQ16647 500 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 WHAMMQ8TF30 809 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 CCT6BQ92526 530 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 MMS19Q96T76 1030 aa11.51□□□□□ -0.57
SREBF2-208ENST00000491541 A0A0U1RQJ8 604 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 PPP1R12AO14974 1030 aaPredicted RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 IQCEQ6IPM2 695 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 ATRIPQ8WXE1 791 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 TATDN2Q93075 761 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 DHTKD1Q96HY7 919 aaPredicted RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 STRBPQ96SI9 672 aaKnown RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 DESI2Q9BSY9 194 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 SKIV2L2P42285 1042 aaKnown RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 NFIL3Q16649 462 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 HYIQ5T013 277 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 ANKS4BQ8N8V4 417 aa11.5□□□□□ -0.57
SREBF2-208ENST00000491541 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 A0A0A6YYK5 440 aaPredicted RBP11.5□□□□□ -0.57
SREBF2-208ENST00000491541 ANXA1P04083 346 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms