RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 PRKAB2O43741 272 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 APPP05067 770 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 BCRP11274 1271 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 SHMT1P34896 483 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
CMSS1-206ENST00000491299 FAM110CQ1W6H9 321 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 SLFNL1Q499Z3 407 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-206ENST00000491299 LNPKQ9C0E8 428 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 HMX1Q9NP08 348 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-206ENST00000491299 PTCH2Q9Y6C5 1203 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 MYPNQ86TC9 1320 aa10.25□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L12C9JPN9 530 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L21D6R901 530 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 TDO2P48775 406 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 RGS19P49795 217 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 NUCB1Q02818 461 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 GABPAQ06546 454 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 NNTQ13423 1086 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 TMEM179Q6ZVK1 233 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 CCAR1Q8IX12 1150 aaKnown RBP10.24□□□□□ -0.77
CMSS1-206ENST00000491299 PI4K2BQ8TCG2 481 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 COA7Q96BR5 231 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 TRIM47Q96LD4 638 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 NACAP1Q9BZK3 213 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 ASCC2Q9H1I8 757 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-206ENST00000491299 SH2D4AQ9H788 454 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 ZNF287Q9HBT7 754 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 ARHGEF10LQ9HCE6 1279 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 SRRDQ9UH36 339 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 FKBPLQ9UIM3 349 aa10.24□□□□□ -0.77
CMSS1-206ENST00000491299 RBBP6Q7Z6E9 1792 aaKnown RBP10.24□□□□□ -0.77
CMSS1-206ENST00000491299 CENPFP49454 3210 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 GPAA1O43292 621 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 CYP2D6P10635 497 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
CMSS1-206ENST00000491299 JAG1P78504 1218 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 SEPT2Q15019 361 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 SHROOM1Q2M3G4 852 aaPredicted RBP10.23□□□□□ -0.77
CMSS1-206ENST00000491299 C12orf60Q5U649 245 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 GIMAP6Q6P9H5 292 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 CHD1LQ86WJ1 897 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 OTUD7AQ8TE49 926 aaPredicted RBP10.23□□□□□ -0.77
CMSS1-206ENST00000491299 EPS8L1Q8TE68 723 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 GPKOWQ92917 476 aaPredicted RBP eCLIP10.23□□□□□ -0.77
CMSS1-206ENST00000491299 ARMC5Q96C12 935 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 EVI5LQ96CN4 794 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 CCDC17Q96LX7 622 aa10.23□□□□□ -0.77
CMSS1-206ENST00000491299 STRBPQ96SI9 672 aaKnown RBP10.23□□□□□ -0.77
CMSS1-206ENST00000491299 CWC22Q9HCG8 908 aaKnown RBP10.23□□□□□ -0.77
CMSS1-206ENST00000491299 BIN2Q9UBW5 565 aaPredicted RBP10.23□□□□□ -0.77
CMSS1-206ENST00000491299 MINDY4BA8MYZ0 360 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 ADH1CP00326 375 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 CHGBP05060 677 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 SLC3A2P08195 630 aaKnown RBP10.22□□□□□ -0.77
CMSS1-206ENST00000491299 GRK4P32298 578 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 CDK8P49336 464 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 PDE1AP54750 535 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 HERVK_113P62684 666 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 UBXN2AP68543 259 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 CAP1Q01518 475 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 ICA1Q05084 483 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 CTR9Q6PD62 1173 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 C16orf86Q6ZW13 317 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 SH3RF1Q7Z6J0 888 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 OSBP2Q969R2 916 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 DYNLL2Q96FJ2 89 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 ZNF333Q96JL9 665 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 C12orf42Q96LP6 360 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 KIAA1683Q9H0B3 1180 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 MKNK2Q9HBH9 465 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 ATP13A2Q9NQ11 1180 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 GMPR2Q9P2T1 348 aaKnown RBP10.22□□□□□ -0.77
CMSS1-206ENST00000491299 HTTP42858 3142 aa10.22□□□□□ -0.77
CMSS1-206ENST00000491299 CYP2D7A0A087X1C5 515 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 PATL2C9JE40 543 aaKnown RBP10.21□□□□□ -0.77
CMSS1-206ENST00000491299 MYCP01106 439 aaPredicted RBP10.21□□□□□ -0.77
CMSS1-206ENST00000491299 VCAM1P19320 739 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 CCNA1P78396 465 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 PRKCZQ05513 592 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 SBK1Q52WX2 424 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 GPRC5AQ8NFJ5 357 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 SH3TC2Q8TF17 1288 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 PAGR1Q9BTK6 254 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 NAPBQ9H115 298 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 STAP2Q9UGK3 403 aa10.21□□□□□ -0.77
CMSS1-206ENST00000491299 DOCK3Q8IZD9 2030 aa10.21□□□□□ -0.78
CMSS1-206ENST00000491299 KIAA0100Q14667 2235 aaKnown RBP10.21□□□□□ -0.78
CMSS1-206ENST00000491299 GSG1L2A8MUP6 293 aa10.2□□□□□ -0.78
CMSS1-206ENST00000491299 M0R2C6 588 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms