RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 FAM155AB1AL88 458 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-210ENST00000490808 KINO60870 393 aaKnown RBP11.75□□□□□ -0.53
HDAC3-210ENST00000490808 CUTAO60888 179 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 CAVIN2O95810 425 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 GNA11P29992 359 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 TM4SF4P48230 202 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 FUT2Q10981 343 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 SNAPC2Q13487 334 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 ZRSR1Q15695 479 aaKnown RBP11.75□□□□□ -0.53
HDAC3-210ENST00000490808 PKN1Q16512 942 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 TMEM179Q6ZVK1 233 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
HDAC3-210ENST00000490808 ZIC5Q96T25 663 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.75□□□□□ -0.53
HDAC3-210ENST00000490808 SAGE1Q9NXZ1 904 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 NYAP2Q9P242 653 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 SNCAIPQ9Y6H5 919 aa11.75□□□□□ -0.53
HDAC3-210ENST00000490808 MORC2Q9Y6X9 1032 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-210ENST00000490808 IGKV6D-41A0A0C4DH26 115 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-210ENST00000490808 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 C19orf81C9J6K1 198 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 CETPP11597 493 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 PTPRAP18433 802 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 INPP5BP32019 993 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 SHMT1P34896 483 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 EVX2Q03828 476 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 TRAF1Q13077 416 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 UVSSAQ2YD98 709 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 SASS6Q6UVJ0 657 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 FASTKD5Q7L8L6 764 aaKnown RBP11.74□□□□□ -0.53
HDAC3-210ENST00000490808 CMTR1Q8N1G2 835 aaKnown RBP11.74□□□□□ -0.53
HDAC3-210ENST00000490808 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 DNAJC18Q9H819 358 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 ELP3Q9H9T3 547 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 C6orf50Q9HD87 102 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 DACT1Q9NYF0 836 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
HDAC3-210ENST00000490808 PCDHA7Q9UN72 937 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 KCNJ14Q9UNX9 436 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 CLIC4Q9Y696 253 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 MYH4Q9Y623 1939 aa11.74□□□□□ -0.53
HDAC3-210ENST00000490808 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 AKR1B1P15121 316 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 CMA1P23946 247 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 GUCY1A2P33402 732 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 USP14P54578 494 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 PABPC4Q13310 644 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDAC3-210ENST00000490808 ABCB5Q2M3G0 1257 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
HDAC3-210ENST00000490808 FSIP1Q8NA03 581 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 DCAF4Q8WV16 495 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-210ENST00000490808 MKL1Q969V6 931 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 CFHR5Q9BXR6 569 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-210ENST00000490808 CLSTN2Q9H4D0 955 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 ZBTB21Q9ULJ3 1066 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 SLC45A1Q9Y2W3 748 aa11.73□□□□□ -0.53
HDAC3-210ENST00000490808 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
HDAC3-210ENST00000490808 BLIDQ8IZY5 108 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 DAGLBQ8NCG7 672 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-210ENST00000490808 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 CLMNQ96JQ2 1002 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 SDF4Q9BRK5 362 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 PYM1Q9BRP8 204 aaKnown RBP11.72□□□□□ -0.53
HDAC3-210ENST00000490808 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 GJB4Q9NTQ9 266 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 BARHL2Q9NY43 387 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 AFG3L2Q9Y4W6 797 aa11.72□□□□□ -0.53
HDAC3-210ENST00000490808 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.53
HDAC3-210ENST00000490808 CCDC194A0A1B0GVG4 234 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 IRF6O14896 467 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 TRPA1O75762 1119 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 PDHBP11177 359 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 LIG1P18858 919 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 NAPAP54920 295 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 ATP2B2Q01814 1243 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 MCTP2Q6DN12 878 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 KANK3Q6NY19 840 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.53
HDAC3-210ENST00000490808 HEATR3Q7Z4Q2 680 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms