RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 PDE1AP54750 535 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 ALX1Q15699 326 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 FAM47AQ5JRC9 791 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 ANO1Q5XXA6 986 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.4□□□□□ -0.26
CDCP1-203ENST00000490471 LRRC47Q8N1G4 583 aaKnown RBP13.4□□□□□ -0.26
CDCP1-203ENST00000490471 REPS2Q8NFH8 660 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 VTI1AQ96AJ9 217 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 MS4A3Q96HJ5 214 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 GLT1D1Q96MS3 346 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 SEZ6LQ9BYH1 1024 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 RAVER2Q9HCJ3 691 aaKnown RBP13.4□□□□□ -0.26
CDCP1-203ENST00000490471 ANAPC4Q9UJX5 808 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
CDCP1-203ENST00000490471 PHF24Q9UPV7 400 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 COL11A1P12107 1806 aaPredicted RBP13.4□□□□□ -0.26
CDCP1-203ENST00000490471 PARP14Q460N5 1801 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
CDCP1-203ENST00000490471 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 DCAF4Q8WV16 495 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 TTC14Q96N46 770 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 CRBNQ96SW2 442 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 SEC62Q99442 399 aaKnown RBP13.39□□□□□ -0.27
CDCP1-203ENST00000490471 STARD7Q9NQZ5 370 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 ADD3Q9UEY8 706 aaKnown RBP13.39□□□□□ -0.27
CDCP1-203ENST00000490471 PLXNA1Q9UIW2 1896 aa13.39□□□□□ -0.27
CDCP1-203ENST00000490471 GREB1LQ9C091 1923 aaPredicted RBP13.39□□□□□ -0.27
CDCP1-203ENST00000490471 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 TLR3O15455 904 aaKnown RBP13.38□□□□□ -0.27
CDCP1-203ENST00000490471 ORC4O43929 436 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
CDCP1-203ENST00000490471 RAG1P15918 1043 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 MCCP23508 829 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 SNX17Q15036 470 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 CCDC96Q2M329 555 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
CDCP1-203ENST00000490471 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 FERMT2Q96AC1 680 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
CDCP1-203ENST00000490471 ELP1O95163 1332 aa13.38□□□□□ -0.27
CDCP1-203ENST00000490471 HTTP42858 3142 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 DNAJC25-GNG10A0A024R161 153 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 PGK1P00558 417 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 CLTBP09497 229 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
CDCP1-203ENST00000490471 TRIM60Q495X7 471 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
CDCP1-203ENST00000490471 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
CDCP1-203ENST00000490471 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 SLC17A8Q8NDX2 589 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 LRCH3Q96II8 777 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 TOX2Q96NM4 488 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 TRERF1Q96PN7 1200 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 TCP11L1Q9NUJ3 509 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
CDCP1-203ENST00000490471 LOC102724159A0A0B4J2E5 919 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 ZNF213O14771 459 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 CABYRO75952 493 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 C6orf222P0C671 652 aaPredicted RBP13.36□□□□□ -0.27
CDCP1-203ENST00000490471 ALAS1P13196 640 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 ACLYP53396 1101 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 CTDSPL2Q05D32 466 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 PWP2Q15269 919 aaKnown RBP13.36□□□□□ -0.27
CDCP1-203ENST00000490471 ZNF697Q5TEC3 545 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 IQCA1Q86XH1 822 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 ESR2Q92731 530 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 HOMER2Q9NSB8 354 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 DIAPH3Q9NSV4 1193 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 CCPG1Q9ULG6 757 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 RIPK3Q9Y572 518 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 ZMYM6O95789 1325 aa13.36□□□□□ -0.27
CDCP1-203ENST00000490471 A0A1W2PQ45 241 aaPredicted RBP13.35□□□□□ -0.27
CDCP1-203ENST00000490471 A0A1W2PQY0 241 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 FGAP02671 866 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
CDCP1-203ENST00000490471 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 TLE2Q04725 743 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 BRDTQ58F21 947 aaPredicted RBP13.35□□□□□ -0.27
CDCP1-203ENST00000490471 GNASQ5JWF2 1037 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 IQSEC1Q6DN90 963 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 ARMCX2Q7L311 632 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
CDCP1-203ENST00000490471 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 LNPKQ9C0E8 428 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDCP1-203ENST00000490471 CCDC171Q6TFL3 1326 aa13.35□□□□□ -0.27
CDCP1-203ENST00000490471 A0A0U1RQG5 324 aaPredicted RBP13.34□□□□□ -0.27
CDCP1-203ENST00000490471 SOX1O00570 391 aaPredicted RBP13.34□□□□□ -0.27
CDCP1-203ENST00000490471 PQBP1O60828 265 aaKnown RBP13.34□□□□□ -0.27
CDCP1-203ENST00000490471 SNAI1O95863 264 aaPredicted RBP13.34□□□□□ -0.27
CDCP1-203ENST00000490471 FGRP09769 529 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 HSPD1P10809 573 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms