RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 HERC5Q9UII4 1024 aaKnown RBP8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 SALL2Q9Y467 1007 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 IVNS1ABPQ9Y6Y0 642 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 EPOPA6NHQ4 379 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 DCDC2CA8MYV0 355 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 COBLO75128 1261 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 ADAMTS4O75173 837 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 ALDH1L1O75891 902 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 PGK1P00558 417 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 SLC5A1P13866 664 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 MYOGP15173 224 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 ADORA2AP29274 412 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 WDR43Q15061 677 aaKnown RBP eCLIP8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 PPP2R2DQ66LE6 453 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 KRT40Q6A162 431 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 CCDC174Q6PII3 467 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 XPNPEP3Q9NQH7 507 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 BAHCC1Q9P281 2608 aa8.88□□□□□ -0.99
PDLIM1-203ENST00000490391 ACACBO00763 2458 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 RFXAPO00287 272 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 SEMA3EO15041 775 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 PHKA1P46020 1223 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 GSK3AP49840 483 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 CDK7P50613 346 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 RABGGTBP53611 331 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 CATSPERGQ6ZRH7 1159 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 RNF180Q86T96 592 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 DPP9Q86TI2 863 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 METTL16Q86W50 562 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 DZIP1Q86YF9 867 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 ANKS1AQ92625 1134 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 HLA-CQ95604 372 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 UIMC1Q96RL1 719 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 IL23AQ9NPF7 189 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 DENND2AQ9ULE3 1009 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 ZBTB21Q9ULJ3 1066 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 SLC27A5Q9Y2P5 690 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 CFAP47Q6ZTR5 3102 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 TECTAO75443 2155 aa8.87□□□□□ -0.99
PDLIM1-203ENST00000490391 PKD1L2Q7Z442 2459 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 GDF11O95390 407 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 RARBP10826 455 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 RFX5P48382 616 aaPredicted RBP8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 ACLYP53396 1101 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 MSS51Q4VC12 460 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 CCSAPQ6IQ19 270 aaPredicted RBP8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L2Q6R6M4 530 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 ATG9AQ7Z3C6 839 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 FAM178BQ8IXR5 827 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 GJD3Q8N144 294 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 ZGPATQ8N5A5 531 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 LENG1Q96BZ8 264 aaPredicted RBP8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 VWCEQ96DN2 955 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 MAML3Q96JK9 1138 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 TSEN34Q9BSV6 310 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 MOV10L1Q9BXT6 1211 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 STARD7Q9NQZ5 370 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 GINM1Q9NU53 330 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 NRBP1Q9UHY1 535 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 PCDHA11Q9Y5I1 949 aa8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 ZNFX1Q9P2E3 1918 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-203ENST00000490391 CDK5RAP2Q96SN8 1893 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 PDS5AQ29RF7 1337 aaKnown RBP8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 EYA2O00167 538 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 STRNO43815 780 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 VAMP4O75379 141 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 ALADP13716 330 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 TAL1P17542 331 aaPredicted RBP8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 VCAM1P19320 739 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 MECOMQ03112 1051 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 FUT2Q10981 343 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 RASGRF1Q13972 1273 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 TMEM199Q8N511 208 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 KLHDC9Q8NEP7 349 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 PPP1R12CQ9BZL4 782 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 GNL3LQ9NVN8 582 aaKnown RBP8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 FRYLO94915 3013 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 ATRXP46100 2492 aa8.85□□□□□ -0.99
PDLIM1-203ENST00000490391 LPXNO60711 386 aa8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 ARHGEF15O94989 841 aa8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 ZNF865P0CJ78 1059 aaPredicted RBP8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 CYP2C18P33260 490 aa8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 ATP2B3Q16720 1220 aa8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 OTOP2Q7RTS6 562 aa8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 FAM126BQ8IXS8 530 aa8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
PDLIM1-203ENST00000490391 MTIF3Q9H2K0 278 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms