RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 CDC37L1Q7L3B6 337 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 NBPF11Q86T75 865 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 TRIM59Q8IWR1 403 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 USP7Q93009 1102 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 SCLYQ96I15 445 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 UBL7Q96S82 380 aaPredicted RBP8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 RNF208Q9H0X6 261 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 CDH19Q9H159 772 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 DISC1Q9NRI5 854 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 CRIM1Q9NZV1 1036 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 WHRNQ9P202 907 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 EMC9Q9Y3B6 208 aa8.52□□□□□ -1.05
TM9SF3-206ENST00000490192 GSC2O15499 205 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 SLBPQ14493 270 aaKnown RBP eCLIP8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 UBE3DQ7Z6J8 389 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 ZBTB46Q86UZ6 589 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 PASD1Q8IV76 773 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 TTC8Q8TAM2 541 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 UBASH3BQ8TF42 649 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 COG1Q8WTW3 980 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 FANCD2OSQ96PS1 177 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 TTC1Q99614 292 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 PUS7LQ9H0K6 701 aaKnown RBP8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 ARNT2Q9HBZ2 717 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 TRHDEQ9UKU6 1024 aa8.51□□□□□ -1.05
TM9SF3-206ENST00000490192 MYL1P05976 194 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 FSTP19883 344 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 FLT3P36888 993 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 SF1Q15637 639 aaKnown RBP8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 EXOSC6Q5RKV6 272 aaKnown RBP8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 ANKRD34AQ69YU3 496 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 FDX2Q6P4F2 183 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 POMZP3Q6PJE2 187 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 C7orf61Q8IZ16 206 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 CNTD1Q8N815 330 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 PI4K2BQ8TCG2 481 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 XAGE3Q8WTP9 111 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 PTPRN2Q92932 1015 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 CHMP4CQ96CF2 233 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 RCC1LQ96I51 464 aaKnown RBP8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 RTFDC1Q9BY42 306 aaPredicted RBP8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 GP6Q9HCN6 339 aa8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 NOB1Q9ULX3 412 aaKnown RBP8.5□□□□□ -1.05
TM9SF3-206ENST00000490192 E2F8A0AVK6 867 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 NEMP1O14524 444 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 SHOXO15266 292 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 KCNH1O95259 989 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 CST3P01034 146 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 NEFMP07197 916 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 ITGA4P13612 1032 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 ID4P47928 161 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 HDAC1Q13547 482 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 TTLL4Q14679 1199 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 NTRK3Q16288 839 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 NBPF12Q5TAG4 269 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 CDCA2Q69YH5 1023 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 PPP4R4Q6NUP7 873 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 TMED8Q6PL24 325 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 UBE2R2Q712K3 238 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 CRACR2BQ8N4Y2 399 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 KCT2Q8NC54 265 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 KCTD13Q8WZ19 329 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 BRF1Q92994 677 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 MAGEB10Q96LZ2 347 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 IFT22Q9H7X7 185 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 CGGBP1Q9UFW8 167 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 RNF112Q9ULX5 631 aa8.49□□□□□ -1.05
TM9SF3-206ENST00000490192 TCRBV16S1A1N1A0A5B0 115 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 GABRDO14764 452 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 CAP2P40123 477 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 OS9Q13438 667 aaPredicted RBP8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 LRP8Q14114 963 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 SYCP2LQ5T4T6 812 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 NUTM2GQ5VZR2 741 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 OR2W6PQ8NHA6 318 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 MPHOSPH6Q99547 160 aaKnown RBP8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 ATXN3LQ9H3M9 355 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 ZNF180Q9UJW8 692 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 AP4E1Q9UPM8 1137 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 COMMD10Q9Y6G5 202 aa8.48□□□□□ -1.05
TM9SF3-206ENST00000490192 CREB3O43889 395 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 GAS2O43903 313 aaKnown RBP8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 BPIP17213 487 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 KCNJ6P48051 423 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 GFRA1P56159 465 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 MAP4K2Q12851 820 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 HLTFQ14527 1009 aaKnown RBP eCLIP8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 MLC1Q15049 377 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 PIK3R6Q5UE93 754 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 SYDE2Q5VT97 1194 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 GTF2IRD2BQ6EKJ0 949 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 TSHZ1Q6ZSZ6 1077 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 MAMDC2Q7Z304 686 aaPredicted RBP8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 GTF2IRD2Q86UP8 949 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms