RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 FAM160B2Q86V87 743 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 TMEM199Q8N511 208 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 KLHDC9Q8NEP7 349 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 CHURC1Q8WUH1 139 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 LENG1Q96BZ8 264 aaPredicted RBP14.01□□□□□ -0.17
FDPS-215ENST00000490140 CEP95Q96GE4 821 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 ACAD9Q9H845 621 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.01□□□□□ -0.17
FDPS-215ENST00000490140 MTMR4Q9NYA4 1195 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 TTC41PQ6P2S7 1318 aa14□□□□□ -0.17
FDPS-215ENST00000490140 IGKV6D-41A0A0C4DH26 115 aa14□□□□□ -0.17
FDPS-215ENST00000490140 ASB14A6NK59 587 aa14□□□□□ -0.17
FDPS-215ENST00000490140 CABYRO75952 493 aa14□□□□□ -0.17
FDPS-215ENST00000490140 SNAI1O95863 264 aaPredicted RBP14□□□□□ -0.17
FDPS-215ENST00000490140 BMP3P12645 472 aa14□□□□□ -0.17
FDPS-215ENST00000490140 DNAJB2P25686 324 aa14□□□□□ -0.17
FDPS-215ENST00000490140 GJA9P57773 515 aa14□□□□□ -0.17
FDPS-215ENST00000490140 TKFCQ3LXA3 575 aa14□□□□□ -0.17
FDPS-215ENST00000490140 CCDC144BQ3MJ40 725 aa14□□□□□ -0.17
FDPS-215ENST00000490140 GNASQ5JWF2 1037 aa14□□□□□ -0.17
FDPS-215ENST00000490140 MFSD5Q6N075 450 aa14□□□□□ -0.17
FDPS-215ENST00000490140 CCDC129Q6ZRS4 1044 aa14□□□□□ -0.17
FDPS-215ENST00000490140 ARMCX2Q7L311 632 aa14□□□□□ -0.17
FDPS-215ENST00000490140 STK11IPQ8N1F8 1099 aa14□□□□□ -0.17
FDPS-215ENST00000490140 OSBP2Q969R2 916 aa14□□□□□ -0.17
FDPS-215ENST00000490140 NAPBQ9H115 298 aa14□□□□□ -0.17
FDPS-215ENST00000490140 UPF3AQ9H1J1 476 aaKnown RBP14□□□□□ -0.17
FDPS-215ENST00000490140 TTYH1Q9H313 450 aaPredicted RBP14□□□□□ -0.17
FDPS-215ENST00000490140 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
FDPS-215ENST00000490140 TBX21Q9UL17 535 aa14□□□□□ -0.17
FDPS-215ENST00000490140 PATL2C9JE40 543 aaKnown RBP13.99□□□□□ -0.17
FDPS-215ENST00000490140 SMARCA5O60264 1052 aaPredicted RBP13.99□□□□□ -0.17
FDPS-215ENST00000490140 ZEB2O60315 1214 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 CHGBP05060 677 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 ASGR1P07306 291 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 ITGB8P26012 769 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 SLC1A4P43007 532 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 CCSAPQ6IQ19 270 aaPredicted RBP13.99□□□□□ -0.17
FDPS-215ENST00000490140 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
FDPS-215ENST00000490140 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 EPB41L4AQ9HCS5 686 aaPredicted RBP13.99□□□□□ -0.17
FDPS-215ENST00000490140 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 ZBTB47Q9UFB7 747 aaPredicted RBP13.99□□□□□ -0.17
FDPS-215ENST00000490140 RIPK3Q9Y572 518 aa13.99□□□□□ -0.17
FDPS-215ENST00000490140 MCM3APO60318 1980 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 TMEM232C9JQI7 657 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 ARVCFO00192 962 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 PRDM1O75626 825 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 NOL8Q76FK4 1167 aaKnown RBP13.98□□□□□ -0.17
FDPS-215ENST00000490140 CCDC144CPQ8IYA2 1237 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 IFNL3Q8IZI9 196 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 TIFAQ96CG3 184 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 GAS2L1Q99501 681 aaPredicted RBP13.98□□□□□ -0.17
FDPS-215ENST00000490140 FSD1Q9BTV5 496 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 DCTPP1Q9H773 170 aa13.98□□□□□ -0.17
FDPS-215ENST00000490140 RAB30Q15771 203 aa13.97□□□□□ -0.17
FDPS-215ENST00000490140 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
FDPS-215ENST00000490140 ZNF576Q9H609 170 aa13.97□□□□□ -0.17
FDPS-215ENST00000490140 RNF146Q9NTX7 359 aa13.97□□□□□ -0.17
FDPS-215ENST00000490140 STX8Q9UNK0 236 aa13.97□□□□□ -0.17
FDPS-215ENST00000490140 TSPY2A6NKD2 308 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 M0R2C6 588 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 PLA2G6O60733 806 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 CDK7P50613 346 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 EPHB4P54760 987 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 NKX3-2P78367 333 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 TNFAIP2Q03169 654 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 PPARAQ07869 468 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 TLK2Q86UE8 772 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 FAM133AQ8N9E0 248 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 STAG1Q8WVM7 1258 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.96□□□□□ -0.177e-29■■■□□ 16.6
FDPS-215ENST00000490140 MSRAQ9UJ68 235 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
FDPS-215ENST00000490140 MYADML2A6NDP7 307 aa13.95□□□□□ -0.18
FDPS-215ENST00000490140 TFAP4Q01664 338 aa13.95□□□□□ -0.18
FDPS-215ENST00000490140 FSCN1Q16658 493 aaKnown RBP13.95□□□□□ -0.18
FDPS-215ENST00000490140 FAM126BQ8IXS8 530 aa13.95□□□□□ -0.18
FDPS-215ENST00000490140 MPHOSPH6Q99547 160 aaKnown RBP13.95□□□□□ -0.18
FDPS-215ENST00000490140 A1CFQ9NQ94 594 aaKnown RBP13.95□□□□□ -0.18
FDPS-215ENST00000490140 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
FDPS-215ENST00000490140 LOC102724159A0A0B4J2E5 919 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 ALAS1P13196 640 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 CSF2RAP15509 400 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 PWP2Q15269 919 aaKnown RBP13.94□□□□□ -0.18
FDPS-215ENST00000490140 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 TSHZ3Q63HK5 1081 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 FGD4Q96M96 766 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 HIPK3Q9H422 1215 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 VTA1Q9NP79 307 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 IL23AQ9NPF7 189 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 Q9Y3F1 56 aa13.94□□□□□ -0.18
FDPS-215ENST00000490140 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
FDPS-215ENST00000490140 RAD50Q92878 1312 aa13.93□□□□□ -0.18
FDPS-215ENST00000490140 MCCP23508 829 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms