RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 TKFCQ3LXA3 575 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 CPLX2Q6PUV4 134 aaKnown RBP14.48□□□□□ -0.09
HDAC1-210ENST00000490081 NBPF11Q86T75 865 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 RIOX2Q8IUF8 465 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 FAM177A1Q8N128 213 aaPredicted RBP14.48□□□□□ -0.09
HDAC1-210ENST00000490081 GTF3C6Q969F1 213 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 KIFC2Q96AC6 838 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 LLPHQ9BRT6 129 aaKnown RBP14.48□□□□□ -0.09
HDAC1-210ENST00000490081 RNF26Q9BY78 433 aaPredicted RBP14.48□□□□□ -0.09
HDAC1-210ENST00000490081 ZNF536O15090 1300 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 PRPF3O43395 683 aaKnown RBP14.47□□□□□ -0.09
HDAC1-210ENST00000490081 CDKL5O76039 1030 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 RXRAP19793 462 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 ERVK-9P63128 1117 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 ERVK-24P63145 666 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 CCNA1P78396 465 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 SCRN1Q12765 414 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 IKQ13123 557 aaPredicted RBP14.47□□□□□ -0.09
HDAC1-210ENST00000490081 TMEM132BQ14DG7 1078 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 TEX13BQ9BXU2 312 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 SPATC1LQ9H0A9 340 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 TXNRD2Q9NNW7 524 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 BTBD7Q9P203 1132 aa14.47□□□□□ -0.09
HDAC1-210ENST00000490081 CCDC85CA6NKD9 419 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 hCG_1984214I3L0E3 225 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 PLEKHA8P1O95397 391 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 CD2BP2O95400 341 aaKnown RBP14.46□□□□□ -0.09
HDAC1-210ENST00000490081 STAT3P40763 770 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 CCT2P78371 535 aaKnown RBP14.46□□□□□ -0.09
HDAC1-210ENST00000490081 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
HDAC1-210ENST00000490081 Q3C1V9 767 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 CCDC144CPQ8IYA2 1237 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 SAMD3Q8N6K7 520 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 ANKRD13CQ8N6S4 541 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 ZNF713Q8N859 430 aaPredicted RBP14.46□□□□□ -0.09
HDAC1-210ENST00000490081 RGS22Q8NE09 1264 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 RRP36Q96EU6 259 aaKnown RBP14.46□□□□□ -0.09
HDAC1-210ENST00000490081 LARP6Q9BRS8 491 aaKnown RBP14.46□□□□□ -0.09
HDAC1-210ENST00000490081 R3HDMLQ9H3Y0 253 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 MROH8Q9H579 483 aa14.46□□□□□ -0.09
HDAC1-210ENST00000490081 SMCHD1A6NHR9 2005 aa14.46□□□□□ -0.1
HDAC1-210ENST00000490081 CNTNAP5Q8WYK1 1306 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 GPR25O00155 361 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 CPLX1O14810 134 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 MGAMO43451 1857 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 STRNO43815 780 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 TBC1D8O95759 1140 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 MAPK4P31152 587 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 SP3Q02447 781 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 CUL4AQ13619 759 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 CDC37Q16543 378 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-210ENST00000490081 QRICH1Q2TAL8 776 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 ABRAQ8N0Z2 381 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 CHST13Q8NET6 341 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 TMX3Q96JJ7 454 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 AMNQ9BXJ7 453 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 CPVLQ9H3G5 476 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 NCOA5Q9HCD5 579 aaKnown RBP14.45□□□□□ -0.1
HDAC1-210ENST00000490081 MAP3K20Q9NYL2 800 aaKnown RBP14.45□□□□□ -0.1
HDAC1-210ENST00000490081 FBXO40Q9UH90 709 aa14.45□□□□□ -0.1
HDAC1-210ENST00000490081 ISY1Q9ULR0 285 aaKnown RBP14.45□□□□□ -0.1
HDAC1-210ENST00000490081 NAP1L2Q9ULW6 460 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-210ENST00000490081 CTDP1Q9Y5B0 961 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-210ENST00000490081 STK36Q9NRP7 1315 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 LARGE1O95461 756 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 FMNL1O95466 1100 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-210ENST00000490081 GNRH1P01148 92 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 GHRHRQ02643 423 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 ARHGEF6Q15052 776 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 FBXO11Q86XK2 927 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 RAB11FIP4Q86YS3 637 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 TRIM22Q8IYM9 498 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 PIGSQ96S52 555 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 MOV10L1Q9BXT6 1211 aaKnown RBP14.44□□□□□ -0.1
HDAC1-210ENST00000490081 VAT1LQ9HCJ6 419 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 SEC63Q9UGP8 760 aaKnown RBP14.44□□□□□ -0.1
HDAC1-210ENST00000490081 CPA4Q9UI42 421 aa14.44□□□□□ -0.1
HDAC1-210ENST00000490081 V9GY48 417 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-210ENST00000490081 ABCB11O95342 1321 aa14.43□□□□□ -0.1
HDAC1-210ENST00000490081 ZNFX1Q9P2E3 1918 aaKnown RBP14.43□□□□□ -0.1
HDAC1-210ENST00000490081 CTDNEP1O95476 244 aa14.43□□□□□ -0.1
HDAC1-210ENST00000490081 LACTBP83111 547 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-210ENST00000490081 SSRP1Q08945 709 aaKnown RBP14.43□□□□□ -0.1
HDAC1-210ENST00000490081 ST3GAL1Q11201 340 aa14.43□□□□□ -0.1
HDAC1-210ENST00000490081 STK3Q13188 491 aa14.43□□□□□ -0.1
HDAC1-210ENST00000490081 PKN1Q16512 942 aa14.43□□□□□ -0.1
HDAC1-210ENST00000490081 PFKFB3Q16875 520 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-210ENST00000490081 SMARCC2Q8TAQ2 1214 aa14.43□□□□□ -0.1
HDAC1-210ENST00000490081 INTS4Q96HW7 963 aaKnown RBP14.43□□□□□ -0.1
HDAC1-210ENST00000490081 RAVER2Q9HCJ3 691 aaKnown RBP14.43□□□□□ -0.1
HDAC1-210ENST00000490081 SH3GLB2Q9NR46 395 aa14.43□□□□□ -0.1
HDAC1-210ENST00000490081 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-210ENST00000490081 PPP1R11O60927 126 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-210ENST00000490081 FKTNO75072 461 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 DEXIO95424 95 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 HMGN5P82970 282 aaKnown RBP14.42□□□□□ -0.1
HDAC1-210ENST00000490081 AKAP17AQ02040 695 aaKnown RBP14.42□□□□□ -0.1
HDAC1-210ENST00000490081 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
HDAC1-210ENST00000490081 CPXCR1Q8N123 301 aa14.42□□□□□ -0.1
HDAC1-210ENST00000490081 CMTR1Q8N1G2 835 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms