RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 MYL10Q9BUA6 226 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 UBA5Q9GZZ9 404 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 MAF1Q9H063 256 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 JMJD4Q9H9V9 463 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 ISY1Q9ULR0 285 aaKnown RBP20.3■□□□□ 0.84
ERCC3-207ENST00000490062 HPS5Q9UPZ3 1129 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 TNPO2O14787 897 aaKnown RBP20.29■□□□□ 0.84
ERCC3-207ENST00000490062 CYTH3O43739 400 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 ERCC3P19447 782 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 APOBRQ0VD83 1088 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 SNRNP48Q6IEG0 339 aaKnown RBP20.29■□□□□ 0.84
ERCC3-207ENST00000490062 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 GPR142Q7Z601 462 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 PLEKHH3Q7Z736 793 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 MICU3Q86XE3 530 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 CHST13Q8NET6 341 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 SOCS4Q8WXH5 440 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 USP6NLQ92738 828 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 CHMP4CQ96CF2 233 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 FAM217BQ9NTX9 383 aaPredicted RBP20.29■□□□□ 0.84
ERCC3-207ENST00000490062 SRRDQ9UH36 339 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 FBXO40Q9UH90 709 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 GJD2Q9UKL4 321 aa20.29■□□□□ 0.84
ERCC3-207ENST00000490062 CTDP1Q9Y5B0 961 aaPredicted RBP20.29■□□□□ 0.84
ERCC3-207ENST00000490062 PLXNB2O15031 1838 aa20.28■□□□□ 0.84
ERCC3-207ENST00000490062 CCDC196A0A1B0GTZ2 297 aa20.28■□□□□ 0.84
ERCC3-207ENST00000490062 FMNL1O95466 1100 aaPredicted RBP20.28■□□□□ 0.84
ERCC3-207ENST00000490062 PDIA3P30101 505 aaKnown RBP20.28■□□□□ 0.84
ERCC3-207ENST00000490062 IRF5Q13568 498 aa20.28■□□□□ 0.84
ERCC3-207ENST00000490062 GRB14Q14449 540 aa20.28■□□□□ 0.84
ERCC3-207ENST00000490062 MORN1Q5T089 497 aa20.28■□□□□ 0.84
ERCC3-207ENST00000490062 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
ERCC3-207ENST00000490062 COA7Q96BR5 231 aa20.28■□□□□ 0.84
ERCC3-207ENST00000490062 RAVER2Q9HCJ3 691 aaKnown RBP20.28■□□□□ 0.84
ERCC3-207ENST00000490062 SLC15A5A6NIM6 579 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 PTPREP23469 700 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 FUT2Q10981 343 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 PLS1Q14651 629 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 RABEP1Q15276 862 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 CDC37Q16543 378 aaPredicted RBP20.27■□□□□ 0.84
ERCC3-207ENST00000490062 RTN1Q16799 776 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 SAMD1Q6SPF0 538 aaPredicted RBP20.27■□□□□ 0.84
ERCC3-207ENST00000490062 SRBD1Q8N5C6 995 aaKnown RBP20.27■□□□□ 0.84
ERCC3-207ENST00000490062 CPVLQ9H3G5 476 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 RIPK3Q9Y572 518 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
ERCC3-207ENST00000490062 GOLGA8AA7E2F4 631 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 GOLGA8BA8MQT2 603 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 ZBTB5O15062 677 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 HOXC6P09630 235 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 RXRAP19793 462 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 METAP2P50579 478 aaKnown RBP eCLIP20.26■□□□□ 0.83
ERCC3-207ENST00000490062 NEK4P51957 841 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 AK2P54819 239 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 TRAF1Q13077 416 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 QRICH1Q2TAL8 776 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 CCAR1Q8IX12 1150 aaKnown RBP20.26■□□□□ 0.83
ERCC3-207ENST00000490062 CPXCR1Q8N123 301 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 AGBL1Q96MI9 1066 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 PTPN22Q9Y2R2 807 aa20.26■□□□□ 0.83
ERCC3-207ENST00000490062 PLEKHA8P1O95397 391 aa20.25■□□□□ 0.83
ERCC3-207ENST00000490062 XRCC5P13010 732 aaKnown RBP20.25■□□□□ 0.83
ERCC3-207ENST00000490062 CDC27P30260 824 aa20.25■□□□□ 0.83
ERCC3-207ENST00000490062 FBXO46Q6PJ61 603 aaPredicted RBP20.25■□□□□ 0.83
ERCC3-207ENST00000490062 NCAPG2Q86XI2 1143 aa20.25■□□□□ 0.83
ERCC3-207ENST00000490062 NUDT12Q9BQG2 462 aa20.25■□□□□ 0.83
ERCC3-207ENST00000490062 CCPG1Q9ULG6 757 aa20.25■□□□□ 0.83
ERCC3-207ENST00000490062 SMCHD1A6NHR9 2005 aa20.25■□□□□ 0.83
ERCC3-207ENST00000490062 BAZ2BQ9UIF8 2168 aaKnown RBP20.25■□□□□ 0.83
ERCC3-207ENST00000490062 MYH6P13533 1939 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 PNMA6FA0A0J9YX94 578 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 GHRHRQ02643 423 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 CCDC174Q6PII3 467 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 RGS22Q8NE09 1264 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 AMNQ9BXJ7 453 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 ACAD9Q9H845 621 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 IVNS1ABPQ9Y6Y0 642 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 ABCB11O95342 1321 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 CNTNAP5Q8WYK1 1306 aa20.24■□□□□ 0.83
ERCC3-207ENST00000490062 DNAJC25-GNG10A0A024R161 153 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 IGHA2P01877 340 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 FCER1AP12319 257 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 FLT3LGP49771 235 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 SNAP25P60880 206 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 PRKCZQ05513 592 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 MAP2K5Q13163 448 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 NTRK3Q16288 839 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 FBXO11Q86XK2 927 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 PXYLP1Q8TE99 480 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 RNF146Q9NTX7 359 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 TPCN1Q9ULQ1 816 aa20.23■□□□□ 0.83
ERCC3-207ENST00000490062 DIS3Q9Y2L1 958 aaKnown RBP20.23■□□□□ 0.83
ERCC3-207ENST00000490062 ZNFX1Q9P2E3 1918 aaKnown RBP20.22■□□□□ 0.83
ERCC3-207ENST00000490062 DHX16O60231 1041 aaKnown RBP20.22■□□□□ 0.83
ERCC3-207ENST00000490062 PFKFB2O60825 505 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 IFNAR1P17181 557 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 ADD1P35611 737 aaKnown RBP20.22■□□□□ 0.83
ERCC3-207ENST00000490062 RGS2P41220 211 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 RAB11FIP4Q86YS3 637 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms