RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SIRT2Q8IXJ6 389 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 TMEM52Q8NDY8 209 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 ZSCAN18Q8TBC5 510 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-218ENST00000490032 CDADC1Q9BWV3 514 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 SLC12A9Q9BXP2 914 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 SMG5Q9UPR3 1016 aaKnown RBP6.5□□□□□ -1.37
HMGN1-218ENST00000490032 ZNF451Q9Y4E5 1061 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 A0A087WZG4 1122 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 NPIPB6E9PJ23 425 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 H0Y8X5 98 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 CBFA2T2O43439 604 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 TP53P04637 393 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-218ENST00000490032 ERVFRD-1P60508 538 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 FBLN7Q53RD9 439 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 NOL9Q5SY16 702 aaKnown RBP6.49□□□□□ -1.37
HMGN1-218ENST00000490032 ADGRF1Q5T601 910 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 SHDQ96IW2 340 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 TGIF2Q9GZN2 237 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
HMGN1-218ENST00000490032 GCM1Q9NP62 436 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 ACSL6Q9UKU0 697 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 TAF6LQ9Y6J9 622 aa6.49□□□□□ -1.37
HMGN1-218ENST00000490032 A0A1W2PQH9 124 aa6.48□□□□□ -1.37
HMGN1-218ENST00000490032 ITGA4P13612 1032 aa6.48□□□□□ -1.37
HMGN1-218ENST00000490032 YBX1P67809 324 aaKnown RBP6.48□□□□□ -1.37
HMGN1-218ENST00000490032 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
HMGN1-218ENST00000490032 LCNL1Q6ZST4 164 aa6.48□□□□□ -1.37
HMGN1-218ENST00000490032 AMIGO3Q86WK7 504 aa6.48□□□□□ -1.37
HMGN1-218ENST00000490032 FIBCD1Q8N539 461 aa6.48□□□□□ -1.37
HMGN1-218ENST00000490032 BRF1Q92994 677 aa6.48□□□□□ -1.37
HMGN1-218ENST00000490032 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
HMGN1-218ENST00000490032 GSTM1P09488 218 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 NASPP49321 788 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-218ENST00000490032 LINC00310P59036 64 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 LAPTM5Q13571 262 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 KIR3DS1Q14943 382 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 TCEAL1Q15170 157 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 HAUS7Q99871 368 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 KLHL25Q9H0H3 589 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 FAM86C1Q9NVL1 165 aa6.47□□□□□ -1.37
HMGN1-218ENST00000490032 SF3B6Q9Y3B4 125 aaKnown RBP6.47□□□□□ -1.37
HMGN1-218ENST00000490032 FGF10O15520 208 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-218ENST00000490032 NOP2P46087 812 aaKnown RBP6.46□□□□□ -1.38
HMGN1-218ENST00000490032 CASP7P55210 303 aa6.46□□□□□ -1.38
HMGN1-218ENST00000490032 CYP2R1Q6VVX0 501 aa6.46□□□□□ -1.38
HMGN1-218ENST00000490032 FCRL3Q96P31 734 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-218ENST00000490032 JMJD8Q96S16 334 aa6.46□□□□□ -1.38
HMGN1-218ENST00000490032 ACBD3Q9H3P7 528 aa6.46□□□□□ -1.38
HMGN1-218ENST00000490032 TNFRSF12AQ9NP84 129 aa6.46□□□□□ -1.38
HMGN1-218ENST00000490032 WHRNQ9P202 907 aa6.46□□□□□ -1.38
HMGN1-218ENST00000490032 MBD1Q9UIS9 605 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-218ENST00000490032 DIS3Q9Y2L1 958 aaKnown RBP6.46□□□□□ -1.38
HMGN1-218ENST00000490032 ABLIM1O14639 778 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 ZSCAN22P10073 491 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-218ENST00000490032 PRKCAP17252 672 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 ARL4AP40617 200 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 POU4F1Q01851 419 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 GNPTABQ3T906 1256 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 HLA-DQA1Q5Y7H0 255 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 TMEM132EQ6IEE7 984 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 KLHL6Q8WZ60 621 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 NOL6Q9H6R4 1146 aaKnown RBP6.45□□□□□ -1.38
HMGN1-218ENST00000490032 STRIP2Q9ULQ0 834 aa6.45□□□□□ -1.38
HMGN1-218ENST00000490032 MPOP05164 745 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 SDHBP21912 280 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 VIPR1P32241 457 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 SRSF3P84103 164 aaKnown RBP6.44□□□□□ -1.38
HMGN1-218ENST00000490032 CYP4F8P98187 520 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 SLC7A5Q01650 507 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 CIAPIN1Q6FI81 312 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 NAT16Q8N8M0 369 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 NUP43Q8NFH3 380 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 SGPP1Q9BX95 441 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 KLHL14Q9P2G3 628 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 IMPACTQ9P2X3 320 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 PCDHB10Q9UN67 800 aa6.44□□□□□ -1.38
HMGN1-218ENST00000490032 EPHX1P07099 455 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 IFNGR1P15260 489 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 MVKQ03426 396 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 CBX2Q14781 532 aaPredicted RBP6.43□□□□□ -1.38
HMGN1-218ENST00000490032 OLFML2BQ68BL8 750 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 HEATR6Q6AI08 1181 aaKnown RBP6.43□□□□□ -1.38
HMGN1-218ENST00000490032 FAM169BQ8N8A8 192 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 ZDHHC15Q96MV8 337 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 PTCHD1Q96NR3 888 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 GBP3Q9H0R5 595 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 CNTD2Q9H8S5 307 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 SUSD2Q9UGT4 822 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 INPP5FQ9Y2H2 1132 aa6.43□□□□□ -1.38
HMGN1-218ENST00000490032 NUAK1O60285 661 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 CD3EP07766 207 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 TMEM62Q0P6H9 643 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 RCSD1Q6JBY9 416 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 CPLX3Q8WVH0 158 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 RCC1LQ96I51 464 aaKnown RBP6.42□□□□□ -1.38
HMGN1-218ENST00000490032 MCMBPQ9BTE3 642 aa6.42□□□□□ -1.38
HMGN1-218ENST00000490032 CCSER2Q9H7U1 834 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms