RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 COG2Q14746 738 aa15.43■□□□□ 0.06
TRAIP-210ENST00000489948 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
TRAIP-210ENST00000489948 HOMER1Q86YM7 354 aa15.43■□□□□ 0.06
TRAIP-210ENST00000489948 TNS4Q8IZW8 715 aa15.43■□□□□ 0.06
TRAIP-210ENST00000489948 MB21D1Q8N884 522 aa15.43■□□□□ 0.06
TRAIP-210ENST00000489948 GTF3C2Q8WUA4 911 aaPredicted RBP15.43■□□□□ 0.06
TRAIP-210ENST00000489948 KIFC2Q96AC6 838 aa15.43■□□□□ 0.06
TRAIP-210ENST00000489948 HOXC10Q9NYD6 342 aa15.43■□□□□ 0.06
TRAIP-210ENST00000489948 ESYT2A0FGR8 921 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 STXBP3O00186 592 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 SYT1P21579 422 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 INHBEP58166 350 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 IRX3P78415 501 aaPredicted RBP15.42■□□□□ 0.06
TRAIP-210ENST00000489948 WWC2Q6AWC2 1192 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 SPRYD3Q8NCJ5 442 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 REPS2Q8NFH8 660 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 CCDC148Q8NFR7 591 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 FBXO18Q8NFZ0 1043 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 CCDC12Q8WUD4 166 aaPredicted RBP15.42■□□□□ 0.06
TRAIP-210ENST00000489948 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
TRAIP-210ENST00000489948 ASCC2Q9H1I8 757 aaPredicted RBP15.42■□□□□ 0.06
TRAIP-210ENST00000489948 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.42■□□□□ 0.06
TRAIP-210ENST00000489948 MYH15Q9Y2K3 1946 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 BTBD19C9JJ37 291 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 VWA5AO00534 786 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 STX6O43752 255 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 PPP1R11O60927 126 aaPredicted RBP15.41■□□□□ 0.06
TRAIP-210ENST00000489948 PPFIA3O75145 1194 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 ICAM1P05362 532 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 OSBPP22059 807 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 SREBF2Q12772 1141 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 NOGQ13253 232 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 LARP1BQ659C4 914 aaKnown RBP15.41■□□□□ 0.06
TRAIP-210ENST00000489948 SHISA4Q96DD7 197 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 ATG4CQ96DT6 458 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 AIFM3Q96NN9 605 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 AMNQ9BXJ7 453 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 ZNF536O15090 1300 aa15.41■□□□□ 0.06
TRAIP-210ENST00000489948 hCG_1642624A0A1W2PR95 340 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 DTNBO60941 627 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 ZBED4O75132 1171 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 HERVK_113P62684 666 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 NUCB2P80303 420 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
TRAIP-210ENST00000489948 TRIM29Q14134 588 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 GALNT17Q6IS24 598 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 HEATR3Q7Z4Q2 680 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 FBXO11Q86XK2 927 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
TRAIP-210ENST00000489948 DAGLBQ8NCG7 672 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 PHF20Q9BVI0 1012 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 VAT1LQ9HCJ6 419 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 ZNF214Q9UL59 606 aaPredicted RBP15.4■□□□□ 0.06
TRAIP-210ENST00000489948 MTMR6Q9Y217 621 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 ABCB11O95342 1321 aa15.4■□□□□ 0.06
TRAIP-210ENST00000489948 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
TRAIP-210ENST00000489948 PDHXO00330 501 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 BRD1O95696 1058 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 MMP1P03956 469 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 CALML3P27482 149 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 KRT40Q6A162 431 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 TYW1BQ6NUM6 668 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 GPKOWQ92917 476 aaPredicted RBP eCLIP15.39■□□□□ 0.05
TRAIP-210ENST00000489948 PARK7Q99497 189 aaKnown RBP15.39■□□□□ 0.05
TRAIP-210ENST00000489948 PTPN18Q99952 460 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 MAF1Q9H063 256 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 ZMYND12Q9H0C1 365 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 GLT8D2Q9H1C3 349 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 CHMP5Q9NZZ3 219 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 VPS54Q9P1Q0 977 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 SMCHD1A6NHR9 2005 aa15.39■□□□□ 0.05
TRAIP-210ENST00000489948 H3BQV1 296 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 TM4SF4P48230 202 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 NAPAP54920 295 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 GHRHRQ02643 423 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 NPY5RQ15761 445 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 DEFB115Q30KQ5 88 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 FAM43AQ8N2R8 423 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 PIBF1Q8WXW3 757 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 CAPNS2Q96L46 248 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 TEX13BQ9BXU2 312 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 PCDHA1Q9Y5I3 950 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 ADGRA2Q96PE1 1338 aa15.38■□□□□ 0.05
TRAIP-210ENST00000489948 IGF2BP3O00425 579 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAIP-210ENST00000489948 COPB2P35606 906 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 GCLCP48506 637 aaPredicted RBP15.37■□□□□ 0.05
TRAIP-210ENST00000489948 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 TKFCQ3LXA3 575 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 CYP4F22Q6NT55 531 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 CCDC174Q6PII3 467 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAIP-210ENST00000489948 IFNL1Q8IU54 200 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 P2RX7Q99572 595 aaKnown RBP15.37■□□□□ 0.05
TRAIP-210ENST00000489948 CCPG1Q9ULG6 757 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 RABGAP1Q9Y3P9 1069 aa15.37■□□□□ 0.05
TRAIP-210ENST00000489948 CTDP1Q9Y5B0 961 aaPredicted RBP15.37■□□□□ 0.05
TRAIP-210ENST00000489948 ZNF236Q9UL36 1845 aa15.36■□□□□ 0.05
TRAIP-210ENST00000489948 VPS37CA5D8V6 355 aaPredicted RBP15.36■□□□□ 0.05
TRAIP-210ENST00000489948 CNMDO75829 334 aa15.36■□□□□ 0.05
TRAIP-210ENST00000489948 ZSCAN22P10073 491 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms