RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 BCRP11274 1271 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 IFNAR1P17181 557 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 CDC37Q16543 378 aaPredicted RBP18.68■□□□□ 0.58
CLIC4-203ENST00000489758 C17orf99Q6UX52 265 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 CCDC82Q8N4S0 544 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 VAT1LQ9HCJ6 419 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 CPA4Q9UI42 421 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 RABGAP1Q9Y3P9 1069 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 DHX16O60231 1041 aaKnown RBP18.67■□□□□ 0.58
CLIC4-203ENST00000489758 PPP1R11O60927 126 aaPredicted RBP18.67■□□□□ 0.58
CLIC4-203ENST00000489758 ZBED4O75132 1171 aa18.67■□□□□ 0.58
CLIC4-203ENST00000489758 OAZ1P54368 228 aa18.67■□□□□ 0.58
CLIC4-203ENST00000489758 CCDC83Q8IWF9 413 aa18.67■□□□□ 0.58
CLIC4-203ENST00000489758 ANKRD13CQ8N6S4 541 aa18.67■□□□□ 0.58
CLIC4-203ENST00000489758 PIGSQ96S52 555 aa18.67■□□□□ 0.58
CLIC4-203ENST00000489758 CPLX1O14810 134 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 ZBTB5O15062 677 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 DTNBO60941 627 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 HSPA8P11142 646 aaKnown RBP18.66■□□□□ 0.58
CLIC4-203ENST00000489758 ERVK-9P63128 1117 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 ERVK-24P63145 666 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 QRICH1Q2TAL8 776 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 Q3C1V9 767 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 CCDC174Q6PII3 467 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 NSUN7Q8NE18 718 aaKnown RBP18.66■□□□□ 0.58
CLIC4-203ENST00000489758 PHKBQ93100 1093 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 PAGR1Q9BTK6 254 aa18.66■□□□□ 0.58
CLIC4-203ENST00000489758 RAVER2Q9HCJ3 691 aaKnown RBP18.66■□□□□ 0.58
CLIC4-203ENST00000489758 V9GY48 417 aaPredicted RBP18.66■□□□□ 0.58
CLIC4-203ENST00000489758 PARP14Q460N5 1801 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 PNMA6FA0A0J9YX94 578 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 hCG_1642624A0A1W2PR95 340 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 K7ELQ4 463 aaPredicted RBP18.65■□□□□ 0.58
CLIC4-203ENST00000489758 PPFIA3O75145 1194 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 FMNL1O95466 1100 aaPredicted RBP18.65■□□□□ 0.58
CLIC4-203ENST00000489758 ICAM1P05362 532 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 TAL1P17542 331 aaPredicted RBP18.65■□□□□ 0.58
CLIC4-203ENST00000489758 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 HOMER1Q86YM7 354 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 GPRC5AQ8NFJ5 357 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 RRP36Q96EU6 259 aaKnown RBP18.65■□□□□ 0.58
CLIC4-203ENST00000489758 AGBL1Q96MI9 1066 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 RNF26Q9BY78 433 aaPredicted RBP18.65■□□□□ 0.58
CLIC4-203ENST00000489758 SPATC1LQ9H0A9 340 aa18.65■□□□□ 0.58
CLIC4-203ENST00000489758 PRPF3O43395 683 aaKnown RBP18.64■□□□□ 0.57
CLIC4-203ENST00000489758 CDKL5O76039 1030 aa18.64■□□□□ 0.57
CLIC4-203ENST00000489758 CUL4AQ13619 759 aa18.64■□□□□ 0.57
CLIC4-203ENST00000489758 PKN1Q16512 942 aa18.64■□□□□ 0.57
CLIC4-203ENST00000489758 CPLX2Q6PUV4 134 aaKnown RBP18.64■□□□□ 0.57
CLIC4-203ENST00000489758 CPXCR1Q8N123 301 aa18.64■□□□□ 0.57
CLIC4-203ENST00000489758 SLC26A6Q9BXS9 759 aa18.64■□□□□ 0.57
CLIC4-203ENST00000489758 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
CLIC4-203ENST00000489758 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.57
CLIC4-203ENST00000489758 TSHZ2Q9NRE2 1034 aa18.64■□□□□ 0.57
CLIC4-203ENST00000489758 JAK2O60674 1132 aa18.63■□□□□ 0.57
CLIC4-203ENST00000489758 FDPSP14324 419 aaKnown RBP18.63■□□□□ 0.57
CLIC4-203ENST00000489758 STAT3P40763 770 aa18.63■□□□□ 0.57
CLIC4-203ENST00000489758 RIOX2Q8IUF8 465 aa18.63■□□□□ 0.57
CLIC4-203ENST00000489758 HSCBQ8IWL3 235 aa18.63■□□□□ 0.57
CLIC4-203ENST00000489758 SMARCC2Q8TAQ2 1214 aa18.63■□□□□ 0.57
CLIC4-203ENST00000489758 LLPHQ9BRT6 129 aaKnown RBP18.63■□□□□ 0.57
CLIC4-203ENST00000489758 RIPK3Q9Y572 518 aa18.63■□□□□ 0.57
CLIC4-203ENST00000489758 CTDP1Q9Y5B0 961 aaPredicted RBP18.63■□□□□ 0.57
CLIC4-203ENST00000489758 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
CLIC4-203ENST00000489758 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
CLIC4-203ENST00000489758 PLS1Q14651 629 aa18.62■□□□□ 0.57
CLIC4-203ENST00000489758 PFKFB3Q16875 520 aaPredicted RBP18.62■□□□□ 0.57
CLIC4-203ENST00000489758 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
CLIC4-203ENST00000489758 SNRNP48Q6IEG0 339 aaKnown RBP18.62■□□□□ 0.57
CLIC4-203ENST00000489758 FBXO11Q86XK2 927 aa18.62■□□□□ 0.57
CLIC4-203ENST00000489758 AMNQ9BXJ7 453 aa18.62■□□□□ 0.57
CLIC4-203ENST00000489758 PORCNQ9H237 461 aa18.62■□□□□ 0.57
CLIC4-203ENST00000489758 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
CLIC4-203ENST00000489758 SEC63Q9UGP8 760 aaKnown RBP18.62■□□□□ 0.57
CLIC4-203ENST00000489758 CCPG1Q9ULG6 757 aa18.62■□□□□ 0.57
CLIC4-203ENST00000489758 STK36Q9NRP7 1315 aa18.62■□□□□ 0.57
CLIC4-203ENST00000489758 GPR25O00155 361 aa18.61■□□□□ 0.57
CLIC4-203ENST00000489758 WWC2Q6AWC2 1192 aa18.61■□□□□ 0.57
CLIC4-203ENST00000489758 TRIM22Q8IYM9 498 aa18.61■□□□□ 0.57
CLIC4-203ENST00000489758 SHCBP1Q8NEM2 672 aa18.61■□□□□ 0.57
CLIC4-203ENST00000489758 TSKSQ9UJT2 592 aa18.61■□□□□ 0.57
CLIC4-203ENST00000489758 PNMA2Q9UL42 364 aa18.61■□□□□ 0.57
CLIC4-203ENST00000489758 SCG2P13521 617 aa18.6■□□□□ 0.57
CLIC4-203ENST00000489758 CCNA1P78396 465 aa18.6■□□□□ 0.57
CLIC4-203ENST00000489758 USH1GQ495M9 461 aa18.6■□□□□ 0.57
CLIC4-203ENST00000489758 CLEC4DQ8WXI8 215 aa18.6■□□□□ 0.57
CLIC4-203ENST00000489758 GPKOWQ92917 476 aaPredicted RBP eCLIP18.6■□□□□ 0.57
CLIC4-203ENST00000489758 COA7Q96BR5 231 aa18.6■□□□□ 0.57
CLIC4-203ENST00000489758 SHISA4Q96DD7 197 aa18.6■□□□□ 0.57
CLIC4-203ENST00000489758 EFCC1Q9HA90 598 aa18.6■□□□□ 0.57
CLIC4-203ENST00000489758 ORC3Q9UBD5 711 aaPredicted RBP18.6■□□□□ 0.57
CLIC4-203ENST00000489758 ABCB11O95342 1321 aa18.59■□□□□ 0.57
CLIC4-203ENST00000489758 OPLAHO14841 1288 aa18.59■□□□□ 0.57
CLIC4-203ENST00000489758 DEXIO95424 95 aa18.59■□□□□ 0.57
CLIC4-203ENST00000489758 SLC25A27O95847 323 aa18.59■□□□□ 0.57
CLIC4-203ENST00000489758 ALAS1P13196 640 aa18.59■□□□□ 0.57
CLIC4-203ENST00000489758 ERCC3P19447 782 aa18.59■□□□□ 0.57
CLIC4-203ENST00000489758 CTGFP29279 349 aa18.59■□□□□ 0.57
CLIC4-203ENST00000489758 COPB2P35606 906 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms