RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PPP1R11O60927 126 aaPredicted RBP16.27■□□□□ 0.2
VPS26A-205ENST00000489656 VCAM1P19320 739 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 NAPAP54920 295 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 PPATQ06203 517 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 TRAF1Q13077 416 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.2
VPS26A-205ENST00000489656 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.2
VPS26A-205ENST00000489656 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
VPS26A-205ENST00000489656 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 GNA11P29992 359 aa16.26■□□□□ 0.19
VPS26A-205ENST00000489656 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
VPS26A-205ENST00000489656 NR5A1Q13285 461 aa16.26■□□□□ 0.19
VPS26A-205ENST00000489656 TTLL12Q14166 644 aaPredicted RBP16.26■□□□□ 0.19
VPS26A-205ENST00000489656 BLIDQ8IZY5 108 aa16.26■□□□□ 0.19
VPS26A-205ENST00000489656 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
VPS26A-205ENST00000489656 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
VPS26A-205ENST00000489656 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 TRAF5O00463 557 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 CXCL11O14625 94 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 FDX1P10109 184 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 PPIL2Q13356 520 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 RILPL1Q5EBL4 403 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 CHADLQ6NUI6 762 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 MOB2Q70IA6 237 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 PRPF38AQ8NAV1 312 aaKnown RBP16.25■□□□□ 0.19
VPS26A-205ENST00000489656 BICD2Q8TD16 824 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 SLF1Q9BQI6 1058 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 RTEL1Q9NZ71 1219 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 KCNH4Q9UQ05 1017 aa16.25■□□□□ 0.19
VPS26A-205ENST00000489656 SMCO2A6NFE2 343 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 FIBPO43427 364 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 NCLP19338 710 aaKnown RBP16.24■□□□□ 0.19
VPS26A-205ENST00000489656 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
VPS26A-205ENST00000489656 HMGCS2P54868 508 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 FBXO11Q86XK2 927 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
VPS26A-205ENST00000489656 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
VPS26A-205ENST00000489656 COA7Q96BR5 231 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 RPAP3Q9H6T3 665 aaPredicted RBP16.24■□□□□ 0.19
VPS26A-205ENST00000489656 ELP3Q9H9T3 547 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 RIC8AQ9NPQ8 531 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 RCOR1Q9UKL0 485 aa16.24■□□□□ 0.19
VPS26A-205ENST00000489656 MYPNQ86TC9 1320 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 A0A0G2JLL6 359 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-205ENST00000489656 YEATS4O95619 227 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 ITGBL1O95965 494 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-205ENST00000489656 TRAPPC10P48553 1259 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 ADCY7P51828 1080 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 DGKZQ13574 1117 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-205ENST00000489656 PROCA1Q8NCQ7 364 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-205ENST00000489656 KIFC2Q96AC6 838 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 GBA2Q9HCG7 927 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-205ENST00000489656 TFIP11Q9UBB9 837 aaKnown RBP16.23■□□□□ 0.19
VPS26A-205ENST00000489656 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 PCDHA1Q9Y5I3 950 aa16.23■□□□□ 0.19
VPS26A-205ENST00000489656 MORC2Q9Y6X9 1032 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-205ENST00000489656 ADAMTS3O15072 1205 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
VPS26A-205ENST00000489656 TOB1P50616 345 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-205ENST00000489656 SKOR2Q2VWA4 1001 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-205ENST00000489656 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
VPS26A-205ENST00000489656 ZNF526Q8TF50 670 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-205ENST00000489656 CUL5Q93034 780 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 SPATA32Q96LK8 384 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 TANGO6Q9C0B7 1094 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
VPS26A-205ENST00000489656 PCDHA6Q9UN73 950 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 PCDHA8Q9Y5H6 950 aa16.22■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 IRF6O14896 467 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 FLOT1O75955 427 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
VPS26A-205ENST00000489656 MRPL12P52815 198 aaKnown RBP16.21■□□□□ 0.19
VPS26A-205ENST00000489656 FMR1Q06787 632 aaKnown RBP eCLIP16.21■□□□□ 0.19
VPS26A-205ENST00000489656 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 EARS2Q5JPH6 523 aaKnown RBP16.21■□□□□ 0.19
VPS26A-205ENST00000489656 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms