RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 GPAA1O43292 621 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 PRDM1O75626 825 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 FAM126BQ8IXS8 530 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
LTA-216ENST00000489638 ANKRD35Q8N283 1001 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
LTA-216ENST00000489638 GMCL1P1Q8NEA9 526 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 CHST13Q8NET6 341 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 MTMR4Q9NYA4 1195 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 FBXO40Q9UH90 709 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 FEM1BQ9UK73 627 aa15.48■□□□□ 0.07
LTA-216ENST00000489638 MCM3APO60318 1980 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 A0A0U1RQG5 324 aaPredicted RBP15.47■□□□□ 0.07
LTA-216ENST00000489638 M0R2C6 588 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 RNF113AO15541 343 aaKnown RBP15.47■□□□□ 0.07
LTA-216ENST00000489638 CSF2RAP15509 400 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 TDO2P48775 406 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 NKX3-2P78367 333 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 PPIGQ13427 754 aaKnown RBP eCLIP15.47■□□□□ 0.07
LTA-216ENST00000489638 TMEM240Q5SV17 173 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 TSHZ3Q63HK5 1081 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 CCDC144CPQ8IYA2 1237 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 SPC25Q9HBM1 224 aa15.47■□□□□ 0.07
LTA-216ENST00000489638 CTDP1Q9Y5B0 961 aaPredicted RBP15.47■□□□□ 0.07
LTA-216ENST00000489638 ARVCFO00192 962 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 TTLL1O95922 423 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 PBX2P40425 430 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 CNTN2Q02246 1040 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 GNASQ5JWF2 1037 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 ZNF444Q8N0Y2 327 aaPredicted RBP15.46■□□□□ 0.07
LTA-216ENST00000489638 FAM133AQ8N9E0 248 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 SYMPKQ92797 1274 aaKnown RBP15.46■□□□□ 0.07
LTA-216ENST00000489638 PBX4Q9BYU1 374 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 ZNF287Q9HBT7 754 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 PRDM6Q9NQX0 595 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 HOMER2Q9NSB8 354 aa15.46■□□□□ 0.07
LTA-216ENST00000489638 ASTN1O14525 1302 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 LRRC37A2A6NM11 1700 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 GRXCR1A8MXD5 290 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 CD4P01730 458 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 ZFYP08048 801 aaPredicted RBP15.45■□□□□ 0.06
LTA-216ENST00000489638 GNAT2P19087 354 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 C20orf194Q5TEA3 1177 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 SLFN13Q68D06 897 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 PSRC1Q6PGN9 363 aaPredicted RBP15.45■□□□□ 0.06
LTA-216ENST00000489638 CCDC174Q6PII3 467 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 TMEM199Q8N511 208 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 PPP1R12CQ9BZL4 782 aa15.45■□□□□ 0.06
LTA-216ENST00000489638 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.44■□□□□ 0.06
LTA-216ENST00000489638 ACRP10323 421 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 BMP3P12645 472 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 BEX3Q00994 111 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 TJAP1Q5JTD0 557 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 ZNF365Q70YC5 407 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 IFNL3Q8IZI9 196 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 NEDD1Q8NHV4 660 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 VTI1AQ96AJ9 217 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 GPATCH3Q96I76 525 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 A1CFQ9NQ94 594 aaKnown RBP15.44■□□□□ 0.06
LTA-216ENST00000489638 ZNF536O15090 1300 aa15.44■□□□□ 0.06
LTA-216ENST00000489638 SOWAHBA6NEL2 793 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 PATL2C9JE40 543 aaKnown RBP15.43■□□□□ 0.06
LTA-216ENST00000489638 TMEM232C9JQI7 657 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 TLR3O15455 904 aaKnown RBP15.43■□□□□ 0.06
LTA-216ENST00000489638 APPP05067 770 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 CYP2C18P33260 490 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 STAT2P52630 851 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 CCDC129Q6ZRS4 1044 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 SLC43A3Q8NBI5 491 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 RNF146Q9NTX7 359 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 RCAN3Q9UKA8 241 aa15.43■□□□□ 0.06
LTA-216ENST00000489638 GNEQ9Y223 722 aaKnown RBP15.43■□□□□ 0.06
LTA-216ENST00000489638 TSPY3P0CV98 308 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 TSPY8P0CW00 308 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 FDX1P10109 184 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 PTGS1P23219 599 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 DIEXFQ68CQ4 756 aaKnown RBP15.42■□□□□ 0.06
LTA-216ENST00000489638 CXCL17Q6UXB2 119 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 GMCL1Q96IK5 515 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 AGBL1Q96MI9 1066 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 IL23AQ9NPF7 189 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 CXXC1Q9P0U4 656 aaPredicted RBP15.42■□□□□ 0.06
LTA-216ENST00000489638 UMODL1Q5DID0 1318 aa15.42■□□□□ 0.06
LTA-216ENST00000489638 PDE4BQ07343 736 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 AKNAD1Q5T1N1 836 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 TLK2Q86UE8 772 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 FAM160B2Q86V87 743 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 HERVK_113Q902F9 699 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 SEC62Q99442 399 aaKnown RBP15.41■□□□□ 0.06
LTA-216ENST00000489638 GAS2L1Q99501 681 aaPredicted RBP15.41■□□□□ 0.06
LTA-216ENST00000489638 PRDM12Q9H4Q4 367 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
LTA-216ENST00000489638 DDX49Q9Y6V7 483 aaKnown RBP15.41■□□□□ 0.06
LTA-216ENST00000489638 GRIN2DO15399 1336 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 CHD9Q3L8U1 2897 aa15.41■□□□□ 0.06
LTA-216ENST00000489638 ASB14A6NK59 587 aa15.4■□□□□ 0.06
LTA-216ENST00000489638 CABYRO75952 493 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms