RNA–Protein interactions for RNA: ENST00000489525.5

MDK-209, Transcript of midkine, humanhuman

TSL 5

Gene MDK, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-209ENST00000489525 TEX13BQ9BXU2 312 aa28.42■■■□□ 2.14
MDK-209ENST00000489525 SLKQ9H2G2 1235 aaPredicted RBP28.42■■■□□ 2.14
MDK-209ENST00000489525 NCOA5Q9HCD5 579 aaKnown RBP28.42■■■□□ 2.14
MDK-209ENST00000489525 ICAM1P05362 532 aa28.41■■■□□ 2.14
MDK-209ENST00000489525 STAT3P40763 770 aa28.41■■■□□ 2.14
MDK-209ENST00000489525 MCM2P49736 904 aa28.41■■■□□ 2.14
MDK-209ENST00000489525 SP3Q02447 781 aa28.41■■■□□ 2.14
MDK-209ENST00000489525 STK3Q13188 491 aa28.41■■■□□ 2.14
MDK-209ENST00000489525 CDC37Q16543 378 aaPredicted RBP28.41■■■□□ 2.14
MDK-209ENST00000489525 RIOX2Q8IUF8 465 aa28.41■■■□□ 2.14
MDK-209ENST00000489525 ZSCAN31Q96LW9 406 aaPredicted RBP28.41■■■□□ 2.14
MDK-209ENST00000489525 MOV10L1Q9BXT6 1211 aaKnown RBP28.41■■■□□ 2.14
MDK-209ENST00000489525 HSPA8P11142 646 aaKnown RBP28.4■■■□□ 2.14
MDK-209ENST00000489525 SHCBP1Q8NEM2 672 aa28.4■■■□□ 2.14
MDK-209ENST00000489525 GTF3C6Q969F1 213 aa28.4■■■□□ 2.14
MDK-209ENST00000489525 RAVER2Q9HCJ3 691 aaKnown RBP28.4■■■□□ 2.14
MDK-209ENST00000489525 VAT1LQ9HCJ6 419 aa28.4■■■□□ 2.14
MDK-209ENST00000489525 CTDP1Q9Y5B0 961 aaPredicted RBP28.4■■■□□ 2.14
MDK-209ENST00000489525 ZBTB5O15062 677 aa28.39■■■□□ 2.13
MDK-209ENST00000489525 DHX16O60231 1041 aaKnown RBP28.39■■■□□ 2.13
MDK-209ENST00000489525 IFNAR1P17181 557 aa28.39■■■□□ 2.13
MDK-209ENST00000489525 CCNA1P78396 465 aa28.39■■■□□ 2.13
MDK-209ENST00000489525 LACTBP83111 547 aaPredicted RBP28.39■■■□□ 2.13
MDK-209ENST00000489525 QRICH1Q2TAL8 776 aa28.39■■■□□ 2.13
MDK-209ENST00000489525 CCDC174Q6PII3 467 aa28.39■■■□□ 2.13
MDK-209ENST00000489525 ZNF296Q8WUU4 475 aaPredicted RBP28.39■■■□□ 2.13
MDK-209ENST00000489525 PIGSQ96S52 555 aa28.39■■■□□ 2.13
MDK-209ENST00000489525 PNMA2Q9UL42 364 aa28.39■■■□□ 2.13
MDK-209ENST00000489525 FKTNO75072 461 aa28.38■■■□□ 2.13
MDK-209ENST00000489525 SLC25A27O95847 323 aa28.38■■■□□ 2.13
MDK-209ENST00000489525 ST3GAL1Q11201 340 aa28.38■■■□□ 2.13
MDK-209ENST00000489525 SNRNP48Q6IEG0 339 aaKnown RBP28.38■■■□□ 2.13
MDK-209ENST00000489525 CPXCR1Q8N123 301 aa28.38■■■□□ 2.13
MDK-209ENST00000489525 AGBL1Q96MI9 1066 aa28.38■■■□□ 2.13
MDK-209ENST00000489525 PORCNQ9H237 461 aa28.38■■■□□ 2.13
MDK-209ENST00000489525 SH2B1Q9NRF2 756 aaPredicted RBP28.38■■■□□ 2.13
MDK-209ENST00000489525 PNMA6FA0A0J9YX94 578 aa28.37■■■□□ 2.13
MDK-209ENST00000489525 COPB2P35606 906 aa28.37■■■□□ 2.13
MDK-209ENST00000489525 PLS1Q14651 629 aa28.37■■■□□ 2.13
MDK-209ENST00000489525 CCDC82Q8N4S0 544 aa28.37■■■□□ 2.13
MDK-209ENST00000489525 RRP36Q96EU6 259 aaKnown RBP28.37■■■□□ 2.13
MDK-209ENST00000489525 RIPK3Q9Y572 518 aa28.37■■■□□ 2.13
MDK-209ENST00000489525 PPP1R11O60927 126 aaPredicted RBP28.36■■■□□ 2.13
MDK-209ENST00000489525 CTGFP29279 349 aa28.36■■■□□ 2.13
MDK-209ENST00000489525 CTCFP49711 727 aaPredicted RBP28.36■■■□□ 2.13
MDK-209ENST00000489525 TKFCQ3LXA3 575 aa28.36■■■□□ 2.13
MDK-209ENST00000489525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.36■■■□□ 2.13
MDK-209ENST00000489525 NECAB1Q8N987 351 aa28.36■■■□□ 2.13
MDK-209ENST00000489525 CCPG1Q9ULG6 757 aa28.36■■■□□ 2.13
MDK-209ENST00000489525 ERCC3P19447 782 aa28.35■■■□□ 2.13
MDK-209ENST00000489525 MAPK4P31152 587 aa28.35■■■□□ 2.13
MDK-209ENST00000489525 CAP1Q01518 475 aa28.35■■■□□ 2.13
MDK-209ENST00000489525 HOMER1Q86YM7 354 aa28.35■■■□□ 2.13
MDK-209ENST00000489525 MROH8Q9H579 483 aa28.35■■■□□ 2.13
MDK-209ENST00000489525 EFCC1Q9HA90 598 aa28.35■■■□□ 2.13
MDK-209ENST00000489525 PRPF3O43395 683 aaKnown RBP28.34■■■□□ 2.13
MDK-209ENST00000489525 FBXO11Q86XK2 927 aa28.34■■■□□ 2.13
MDK-209ENST00000489525 SNX21Q969T3 373 aa28.34■■■□□ 2.13
MDK-209ENST00000489525 AMNQ9BXJ7 453 aa28.34■■■□□ 2.13
MDK-209ENST00000489525 RNF26Q9BY78 433 aaPredicted RBP28.34■■■□□ 2.13
MDK-209ENST00000489525 CPLX1O14810 134 aa28.33■■■□□ 2.13
MDK-209ENST00000489525 CTDNEP1O95476 244 aa28.33■■■□□ 2.13
MDK-209ENST00000489525 CPLX2Q6PUV4 134 aaKnown RBP28.33■■■□□ 2.13
MDK-209ENST00000489525 PHKBQ93100 1093 aa28.33■■■□□ 2.13
MDK-209ENST00000489525 ERO1AQ96HE7 468 aa28.33■■■□□ 2.13
MDK-209ENST00000489525 TMX3Q96JJ7 454 aa28.33■■■□□ 2.13
MDK-209ENST00000489525 ARHGAP39Q9C0H5 1083 aa28.33■■■□□ 2.13
MDK-209ENST00000489525 V9GY48 417 aaPredicted RBP28.33■■■□□ 2.13
MDK-209ENST00000489525 NCAPG2Q86XI2 1143 aa28.32■■■□□ 2.12
MDK-209ENST00000489525 CHST13Q8NET6 341 aa28.32■■■□□ 2.12
MDK-209ENST00000489525 CD99L2Q8TCZ2 262 aa28.32■■■□□ 2.12
MDK-209ENST00000489525 TRIM47Q96LD4 638 aa28.32■■■□□ 2.12
MDK-209ENST00000489525 RBM27Q9P2N5 1060 aaKnown RBP28.32■■■□□ 2.12
MDK-209ENST00000489525 SEC63Q9UGP8 760 aaKnown RBP28.32■■■□□ 2.12
MDK-209ENST00000489525 ZSWIM8A7E2V4 1837 aa28.32■■■□□ 2.12
MDK-209ENST00000489525 CDKL5O76039 1030 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 FMNL1O95466 1100 aaPredicted RBP28.31■■■□□ 2.12
MDK-209ENST00000489525 TAL1P17542 331 aaPredicted RBP28.31■■■□□ 2.12
MDK-209ENST00000489525 PSMC4P43686 418 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 FCGRTP55899 365 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 TRAF1Q13077 416 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 KIF22Q14807 665 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 GPR142Q7Z601 462 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 PIBF1Q8WXW3 757 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 TRERF1Q96PN7 1200 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 FBXO40Q9UH90 709 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 MGAMO43451 1857 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 ABCB11O95342 1321 aa28.31■■■□□ 2.12
MDK-209ENST00000489525 hCG_1642624A0A1W2PR95 340 aa28.3■■■□□ 2.12
MDK-209ENST00000489525 ALAS1P13196 640 aa28.3■■■□□ 2.12
MDK-209ENST00000489525 LBX1P52954 281 aa28.3■■■□□ 2.12
MDK-209ENST00000489525 PKN1Q16512 942 aa28.3■■■□□ 2.12
MDK-209ENST00000489525 CLEC4DQ8WXI8 215 aa28.3■■■□□ 2.12
MDK-209ENST00000489525 RNF146Q9NTX7 359 aa28.3■■■□□ 2.12
MDK-209ENST00000489525 BAZ2BQ9UIF8 2168 aaKnown RBP28.3■■■□□ 2.12
MDK-209ENST00000489525 STK36Q9NRP7 1315 aa28.3■■■□□ 2.12
MDK-209ENST00000489525 PFKFB3Q16875 520 aaPredicted RBP28.29■■■□□ 2.12
MDK-209ENST00000489525 USH1GQ495M9 461 aa28.29■■■□□ 2.12
MDK-209ENST00000489525 PLEKHH3Q7Z736 793 aa28.29■■■□□ 2.12
MDK-209ENST00000489525 CCDC83Q8IWF9 413 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms