RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 C19orf81C9J6K1 198 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 SLC30A4O14863 429 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 PI15O43692 258 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 GJB5O95377 273 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 AOC1P19801 751 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 CAP2P40123 477 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 KCNJ6P48051 423 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 WDR5P61964 334 aaKnown RBP9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 RRP1BQ14684 758 aaKnown RBP9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 LARP1BQ659C4 914 aaKnown RBP9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 LBX2Q6XYB7 198 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 ZSCAN29Q8IWY8 852 aaPredicted RBP9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 ADAMTS20P59510 1910 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 ZNFX1Q9P2E3 1918 aaKnown RBP9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 FAM196BA6NMK8 535 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 H3BNC9 293 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 C6orf222P0C671 652 aaPredicted RBP9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 PLCG2P16885 1265 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 TGM1P22735 817 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 RFC2P35250 354 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 RBM25P49756 843 aaKnown RBP9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 RRP1P56182 461 aaKnown RBP9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 MTMR3Q13615 1198 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 VARS2Q5ST30 1063 aaKnown RBP9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 ZBTB33Q86T24 672 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 KREMEN2Q8NCW0 462 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 SHCBP1Q8NEM2 672 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 MFSD1Q9H3U5 465 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 USP40Q9NVE5 1235 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 HYPKQ9NX55 129 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 NCDNQ9UBB6 729 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 ZBTB47Q9UFB7 747 aaPredicted RBP9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 IQSEC3Q9UPP2 1182 aaPredicted RBP9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 FREM2Q5SZK8 3169 aa9.57□□□□□ -0.88
EXOSC3-206ENST00000489414 LINC01565O15544 149 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 DUSP11O75319 330 aaKnown RBP9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 BRD1O95696 1058 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 DEFB103AP81534 67 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 COASYQ13057 564 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 EPC2Q52LR7 807 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 N4BP2L1Q5TBK1 243 aaPredicted RBP9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 FAM212AQ96EL1 285 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 TINF2Q9BSI4 451 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 TMEM121BQ9BXQ6 578 aaPredicted RBP9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 INCENPQ9NQS7 918 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 USP15Q9Y4E8 981 aaPredicted RBP9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
EXOSC3-206ENST00000489414 NLRC5Q86WI3 1866 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 CSF1RP07333 972 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 GTF2F1P35269 517 aaKnown RBP eCLIP9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 GPM6BQ13491 265 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 ABRAQ8N0Z2 381 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 NETO1Q8TDF5 533 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 BBC3Q96PG8 261 aaPredicted RBP9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 PLA2G12BQ9BX93 195 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 MOV10L1Q9BXT6 1211 aaKnown RBP9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 UPF3AQ9H1J1 476 aaKnown RBP9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 CLEC1BQ9P126 229 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 SORCS3Q9UPU3 1222 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 KALRNO60229 2985 aa9.55□□□□□ -0.88
EXOSC3-206ENST00000489414 SPTAN1Q13813 2472 aaKnown RBP9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 CTAGE5O15320 804 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 ADAM15Q13444 863 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 ITGA7Q13683 1181 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 UBE4AQ14139 1066 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 KRT24Q2M2I5 525 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 FBXO33Q7Z6M2 555 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 CDCA7LQ96GN5 454 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 METTL22Q9BUU2 404 aaPredicted RBP9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 SEZ6LQ9BYH1 1024 aa9.54□□□□□ -0.88
EXOSC3-206ENST00000489414 FTOQ9C0B1 505 aaKnown RBP eCLIP9.54□□□□□ -0.881e-6■□□□□ 8.2
EXOSC3-206ENST00000489414 AKAP13Q12802 2813 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 ANKRD18BA2A2Z9 1011 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 SPDYE16A6NNV3 312 aaPredicted RBP9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 ADCY6O43306 1168 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 NPR3P17342 541 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 ATF7P17544 494 aaPredicted RBP9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 ERCC3P19447 782 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 NDUFV1P49821 464 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 GJA9P57773 515 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 DIEXFQ68CQ4 756 aaKnown RBP9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 FLCNQ8NFG4 579 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 SAMD11Q96NU1 681 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 RTP3Q9BQQ7 232 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 SMOC2Q9H3U7 446 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 DDX4Q9NQI0 724 aaKnown RBP9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 BABAM1Q9NWV8 329 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 FAM184BQ9ULE4 1060 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 USP18Q9UMW8 372 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 CELSR3Q9NYQ7 3312 aa9.53□□□□□ -0.88
EXOSC3-206ENST00000489414 USP17L15C9J2P7 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L13C9JLJ4 530 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms