RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
SMTN-218ENST00000489337 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
SMTN-218ENST00000489337 BCAS4Q8TDM0 211 aa13.18□□□□□ -0.3
SMTN-218ENST00000489337 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
SMTN-218ENST00000489337 H0YHG0 523 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 ABL1P00519 1130 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 GSCP56915 257 aaPredicted RBP13.17□□□□□ -0.3
SMTN-218ENST00000489337 PRPF6O94906 941 aaKnown RBP13.17□□□□□ -0.3
SMTN-218ENST00000489337 INPP5BP32019 993 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 POSTNQ15063 836 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 WDR93Q6P2C0 686 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
SMTN-218ENST00000489337 ZNF444Q8N0Y2 327 aaPredicted RBP13.17□□□□□ -0.3
SMTN-218ENST00000489337 KAT14Q9H8E8 782 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 BTAF1O14981 1849 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 LAMA4Q16363 1823 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 SHTN1A0MZ66 631 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 GOLGA6CA6NDK9 693 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 ZMYND10O75800 440 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 GOLGA6DP0CG33 693 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 SRGNP10124 158 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 GGCXP38435 758 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 AARSP49588 968 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMTN-218ENST00000489337 TRMT1LQ7Z2T5 733 aaKnown RBP13.17□□□□□ -0.3
SMTN-218ENST00000489337 LARGE2Q8N3Y3 721 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 GOLGA6AQ9NYA3 693 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 VPS54Q9P1Q0 977 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 HPCAL4Q9UM19 191 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 ATRNO75882 1429 aa13.17□□□□□ -0.3
SMTN-218ENST00000489337 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 CASP14P31944 242 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 FBXO33Q7Z6M2 555 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
SMTN-218ENST00000489337 TCP10L2B9ZVM9 353 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
SMTN-218ENST00000489337 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
SMTN-218ENST00000489337 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
SMTN-218ENST00000489337 IRAK1P51617 712 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 STX17P56962 302 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 CRACR2BQ8N4Y2 399 aaPredicted RBP13.16□□□□□ -0.3
SMTN-218ENST00000489337 WASF1Q92558 559 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
SMTN-218ENST00000489337 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
SMTN-218ENST00000489337 SPEF2Q9C093 1822 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 MCM3P25205 808 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 PTPAQ15257 358 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 KRT40Q6A162 431 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 GRAMD1CQ8IYS0 662 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 COG1Q8WTW3 980 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.3
SMTN-218ENST00000489337 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 DONSONQ9NYP3 566 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 SUFUQ9UMX1 484 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 CEP350Q5VT06 3117 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
SMTN-218ENST00000489337 SNAP25P60880 206 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 NFIAQ12857 509 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
SMTN-218ENST00000489337 RASGRP4Q8TDF6 673 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 EHD4Q9H223 541 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 GUCA1BQ9UMX6 200 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 CCDC196A0A1B0GTZ2 297 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 ENC1O14682 589 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 MFAP3LO75121 409 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 DPEP1P16444 411 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 NR5A1Q13285 461 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 ESR2Q92731 530 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 TDRD3Q9H7E2 651 aaKnown RBP13.15□□□□□ -0.3
SMTN-218ENST00000489337 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
SMTN-218ENST00000489337 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
SMTN-218ENST00000489337 RTN1Q16799 776 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 KRI1Q8N9T8 703 aaKnown RBP13.14□□□□□ -0.31
SMTN-218ENST00000489337 CAPZA3Q96KX2 299 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 JPH2Q9BR39 696 aaPredicted RBP13.14□□□□□ -0.31
SMTN-218ENST00000489337 SAMM50Q9Y512 469 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 CAPN7Q9Y6W3 813 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
SMTN-218ENST00000489337 BAG3O95817 575 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 PDE6BP35913 854 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 USP14P54578 494 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 KCNV1Q6PIU1 500 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 GSPT2Q8IYD1 628 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms