RNA–Protein interactions for RNA: ENST00000489319.5

PDE9A-224, Transcript of phosphodiesterase 9A, humanhuman

TSL 2

Gene PDE9A, Length 3,412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-224ENST00000489319 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
PDE9A-224ENST00000489319 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
PDE9A-224ENST00000489319 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
PDE9A-224ENST00000489319 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
PDE9A-224ENST00000489319 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
PDE9A-224ENST00000489319 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
PDE9A-224ENST00000489319 GDAP1L1Q96MZ0 367 aa13.16□□□□□ -0.3
PDE9A-224ENST00000489319 MAF1Q9H063 256 aa13.16□□□□□ -0.3
PDE9A-224ENST00000489319 TSPY2A6NKD2 308 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
PDE9A-224ENST00000489319 UTP14CQ5TAP6 766 aaKnown RBP13.15□□□□□ -0.3
PDE9A-224ENST00000489319 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 TXNRD3Q86VQ6 643 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
PDE9A-224ENST00000489319 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
PDE9A-224ENST00000489319 GGA1Q9UJY5 639 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 USP17L8P0C7I0 530 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 MCM6Q14566 821 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 ZNF569Q5MCW4 686 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 WASF1Q92558 559 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 SUGCTQ9HAC7 445 aa13.15□□□□□ -0.3
PDE9A-224ENST00000489319 N4BP3O15049 544 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 PHACTR2O75167 634 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 KIF20AO95235 890 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
PDE9A-224ENST00000489319 IQCA1Q86XH1 822 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 RNF225M0QZC1 329 aaPredicted RBP13.14□□□□□ -0.31
PDE9A-224ENST00000489319 ACTN4O43707 911 aaKnown RBP13.14□□□□□ -0.31
PDE9A-224ENST00000489319 KRT2P35908 639 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 CUL4BQ13620 913 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 RAD9BQ6WBX8 426 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 PAGE5Q96GU1 130 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 TRIM10Q9UDY6 481 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 PKN1Q16512 942 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 NOL9Q5SY16 702 aaKnown RBP13.14□□□□□ -0.31
PDE9A-224ENST00000489319 FKBP15Q5T1M5 1219 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
PDE9A-224ENST00000489319 NEK11Q8NG66 645 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
PDE9A-224ENST00000489319 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
PDE9A-224ENST00000489319 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
PDE9A-224ENST00000489319 KIF3CO14782 793 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 RAD21O60216 631 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 SLFN14P0C7P3 912 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 CAVIN4Q5BKX8 364 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 STAG1Q8WVM7 1258 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 SYNRGQ9UMZ2 1314 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 ENC1O14682 589 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 MRPS25P82663 173 aaKnown RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 STAG2Q8N3U4 1231 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 ARHGAP6O43182 974 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 ZSCAN12O43309 604 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 XBP1P17861 261 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 KCTD19Q17RG1 926 aaPredicted RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 FAM83AQ86UY5 434 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 GNL3LQ9NVN8 582 aaKnown RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
PDE9A-224ENST00000489319 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
PDE9A-224ENST00000489319 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 ALX1Q15699 326 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
PDE9A-224ENST00000489319 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
PDE9A-224ENST00000489319 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
PDE9A-224ENST00000489319 AKR1B15C9JRZ8 316 aaPredicted RBP13.12□□□□□ -0.31
PDE9A-224ENST00000489319 MORC3Q14149 939 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 TERF2Q15554 542 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 CTR9Q6PD62 1173 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
PDE9A-224ENST00000489319 EHD4Q9H223 541 aa13.12□□□□□ -0.31
PDE9A-224ENST00000489319 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
PDE9A-224ENST00000489319 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
PDE9A-224ENST00000489319 KIF2AO00139 706 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms