RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 PPP1R18Q6NYC8 613 aa20.66■□□□□ 0.9
CD40-206ENST00000489304 PIK3AP1Q6ZUJ8 805 aa20.66■□□□□ 0.9
CD40-206ENST00000489304 KLRG1Q96E93 195 aa20.66■□□□□ 0.9
CD40-206ENST00000489304 HOOK2Q96ED9 719 aa20.66■□□□□ 0.9
CD40-206ENST00000489304 VCPKMTQ9H867 229 aa20.66■□□□□ 0.9
CD40-206ENST00000489304 PCDHA6Q9UN73 950 aa20.66■□□□□ 0.9
CD40-206ENST00000489304 PCDHA8Q9Y5H6 950 aa20.66■□□□□ 0.9
CD40-206ENST00000489304 SMCO2A6NFE2 343 aa20.65■□□□□ 0.9
CD40-206ENST00000489304 GNA11P29992 359 aa20.65■□□□□ 0.9
CD40-206ENST00000489304 SNAP25P60880 206 aa20.65■□□□□ 0.9
CD40-206ENST00000489304 RBM43Q6ZSC3 357 aaKnown RBP20.65■□□□□ 0.9
CD40-206ENST00000489304 SCYL3Q8IZE3 742 aa20.65■□□□□ 0.9
CD40-206ENST00000489304 FMR1NBQ8N0W7 255 aaPredicted RBP20.65■□□□□ 0.9
CD40-206ENST00000489304 KRI1Q8N9T8 703 aaKnown RBP20.65■□□□□ 0.9
CD40-206ENST00000489304 GINM1Q9NU53 330 aa20.65■□□□□ 0.9
CD40-206ENST00000489304 FAM237AA0A1B0GTK4 181 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 TMEM232C9JQI7 657 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 ZBTB5O15062 677 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 PPP1R11O60927 126 aaPredicted RBP20.64■□□□□ 0.9
CD40-206ENST00000489304 PTPREP23469 700 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 MAP3K11Q16584 847 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 TTC38Q5R3I4 469 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 FAM83BQ5T0W9 1011 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 BTNL9Q6UXG8 535 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 TNMDQ9H2S6 317 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 TSPY26PQ9H489 355 aa20.64■□□□□ 0.9
CD40-206ENST00000489304 FBXO2Q9UK22 296 aaPredicted RBP20.64■□□□□ 0.9
CD40-206ENST00000489304 WDR90Q96KV7 1748 aa20.64■□□□□ 0.89
CD40-206ENST00000489304 A0A1B0GVL5 298 aa20.64■□□□□ 0.89
CD40-206ENST00000489304 IQCA1LA6NCM1 817 aa20.64■□□□□ 0.89
CD40-206ENST00000489304 ATP2B1P20020 1258 aa20.64■□□□□ 0.89
CD40-206ENST00000489304 ZC3H15Q8WU90 426 aaKnown RBP20.64■□□□□ 0.89
CD40-206ENST00000489304 COA7Q96BR5 231 aa20.64■□□□□ 0.89
CD40-206ENST00000489304 CDCA5Q96FF9 252 aa20.64■□□□□ 0.89
CD40-206ENST00000489304 GOPCQ9HD26 462 aa20.64■□□□□ 0.89
CD40-206ENST00000489304 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
CD40-206ENST00000489304 CCDC194A0A1B0GVG4 234 aa20.63■□□□□ 0.89
CD40-206ENST00000489304 NDUFA8P51970 172 aa20.63■□□□□ 0.89
CD40-206ENST00000489304 RESP18Q5W5W9 173 aa20.63■□□□□ 0.89
CD40-206ENST00000489304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.63■□□□□ 0.89
CD40-206ENST00000489304 FEZ1Q99689 392 aa20.63■□□□□ 0.89
CD40-206ENST00000489304 FUCA2Q9BTY2 467 aa20.63■□□□□ 0.89
CD40-206ENST00000489304 SH2D4AQ9H788 454 aa20.63■□□□□ 0.89
CD40-206ENST00000489304 SRPRBQ9Y5M8 271 aaKnown RBP20.63■□□□□ 0.89
CD40-206ENST00000489304 DOCK1Q14185 1865 aa20.63■□□□□ 0.89
CD40-206ENST00000489304 WNT7AO00755 349 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 CTAGE5O15320 804 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 KINO60870 393 aaKnown RBP20.62■□□□□ 0.89
CD40-206ENST00000489304 XRCC6P12956 609 aaKnown RBP eCLIP20.62■□□□□ 0.89
CD40-206ENST00000489304 PTPRAP18433 802 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 CAMK4Q16566 473 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 SHC4Q6S5L8 630 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 KRT25Q7Z3Z0 450 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 ZNF579Q8NAF0 562 aaKnown RBP20.62■□□□□ 0.89
CD40-206ENST00000489304 RASGRP4Q8TDF6 673 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 RRAGCQ9HB90 399 aa20.62■□□□□ 0.89
CD40-206ENST00000489304 PFKFB1P16118 471 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 IKQ13123 557 aaPredicted RBP20.61■□□□□ 0.89
CD40-206ENST00000489304 SYDE2Q5VT97 1194 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 MOB2Q70IA6 237 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 CLIC6Q96NY7 704 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 RBSNQ9H1K0 784 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 HPSEQ9Y251 543 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 SCN4AP35499 1836 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 ADCY7P51828 1080 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 FMR1Q06787 632 aaKnown RBP eCLIP20.61■□□□□ 0.89
CD40-206ENST00000489304 SPP2Q13103 211 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 ZNF174Q15697 407 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 QRICH1Q2TAL8 776 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.61■□□□□ 0.89
CD40-206ENST00000489304 PICK1Q9NRD5 415 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
CD40-206ENST00000489304 TAL1P17542 331 aaPredicted RBP20.6■□□□□ 0.89
CD40-206ENST00000489304 ATP2C1P98194 919 aaPredicted RBP20.6■□□□□ 0.89
CD40-206ENST00000489304 MTMR2Q13614 643 aa20.6■□□□□ 0.89
CD40-206ENST00000489304 CDC37Q16543 378 aaPredicted RBP20.6■□□□□ 0.89
CD40-206ENST00000489304 NOL9Q5SY16 702 aaKnown RBP20.6■□□□□ 0.89
CD40-206ENST00000489304 REXO1Q8N1G1 1221 aaKnown RBP20.6■□□□□ 0.89
CD40-206ENST00000489304 FERMT2Q96AC1 680 aa20.6■□□□□ 0.89
CD40-206ENST00000489304 KIAA1683Q9H0B3 1180 aa20.6■□□□□ 0.89
CD40-206ENST00000489304 RIC8AQ9NPQ8 531 aa20.6■□□□□ 0.89
CD40-206ENST00000489304 MAP3K9P80192 1104 aa20.59■□□□□ 0.89
CD40-206ENST00000489304 PNMA8AQ86V59 439 aaPredicted RBP20.59■□□□□ 0.89
CD40-206ENST00000489304 WDR18Q9BV38 432 aa20.59■□□□□ 0.89
CD40-206ENST00000489304 EMILIN3Q9NT22 766 aa20.59■□□□□ 0.89
CD40-206ENST00000489304 FBXO28Q9NVF7 368 aa20.59■□□□□ 0.89
CD40-206ENST00000489304 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
CD40-206ENST00000489304 SNCAIPQ9Y6H5 919 aa20.59■□□□□ 0.89
CD40-206ENST00000489304 ZHX2Q9Y6X8 837 aa20.59■□□□□ 0.89
CD40-206ENST00000489304 PLA2G6O60733 806 aa20.58■□□□□ 0.89
CD40-206ENST00000489304 ZNF202O95125 648 aa20.58■□□□□ 0.89
CD40-206ENST00000489304 PTGDRQ13258 359 aa20.58■□□□□ 0.89
CD40-206ENST00000489304 VGLL4Q14135 290 aa20.58■□□□□ 0.89
CD40-206ENST00000489304 NONOQ15233 471 aaKnown RBP eCLIP20.58■□□□□ 0.89
CD40-206ENST00000489304 MAP1SQ66K74 1059 aaPredicted RBP20.58■□□□□ 0.89
CD40-206ENST00000489304 TIGD1Q96MW7 591 aa20.58■□□□□ 0.89
CD40-206ENST00000489304 MRVI1Q9Y6F6 885 aa20.58■□□□□ 0.89
CD40-206ENST00000489304 GRIN1Q05586 938 aa20.58■□□□□ 0.88
CD40-206ENST00000489304 INF2Q27J81 1249 aa20.58■□□□□ 0.88
CD40-206ENST00000489304 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms