RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 HP1BP3Q5SSJ5 553 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 TTBK2Q6IQ55 1244 aa10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 TTLL6Q8N841 843 aa10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 DICER1Q9UPY3 1922 aaKnown RBP10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 UBR2Q8IWV8 1755 aa10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 WDR33Q9C0J8 1336 aaKnown RBP10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 PDE4DIPQ5VU43 2346 aa10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 POLRMTO00411 1230 aaKnown RBP10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 CYP19A1P11511 503 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 ARNTP27540 789 aa10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 CRKLP46109 303 aaKnown RBP10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 HDLBPQ00341 1268 aaKnown RBP10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 HGSNATQ68CP4 663 aa10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 GALNT11Q8NCW6 608 aa10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 RSRP1Q9BUV0 290 aa10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 USP42Q9H9J4 1324 aaKnown RBP10.27□□□□□ -0.77
TRAPPC12-221ENST00000489032 KDM3BQ7LBC6 1761 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 A0A087WZG4 1122 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 FAM229AH3BQW9 127 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 DEAF1O75398 565 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 ZNF853P0CG23 659 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 ELNP15502 786 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 CANXP27824 592 aaKnown RBP10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 ERCC5P28715 1186 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 LIG3P49916 1009 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 NT5DC4Q86YG4 428 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 MYH16Q9H6N6 1097 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 SRP68Q9UHB9 627 aaKnown RBP10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 CYP8B1Q9UNU6 501 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 MYH14Q7Z406 1995 aaKnown RBP10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 DLEC1Q9Y238 1755 aa10.26□□□□□ -0.77
TRAPPC12-221ENST00000489032 TJP1Q07157 1748 aa10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 DDNO94850 711 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 SPATA31C1P0DKV0 1188 aa10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 INTS5Q6P9B9 1019 aaKnown RBP10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 USP48Q86UV5 1035 aa10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 KCNB2Q92953 911 aa10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 YTHDC1Q96MU7 727 aaKnown RBP10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 TRIM56Q9BRZ2 755 aaKnown RBP10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 SCN4AP35499 1836 aa10.25□□□□□ -0.77
TRAPPC12-221ENST00000489032 MINDY4BA8MYZ0 360 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 PAGE1O75459 146 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 A1BGP04217 495 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 HOXB7P09629 217 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 EIF2S2P20042 333 aaKnown RBP10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 MAOBP27338 520 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 TM4SF1P30408 202 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 IL6STP40189 918 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 RPS26P62854 115 aaKnown RBP10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 PDE3AQ14432 1141 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 LLGL2Q6P1M3 1020 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 IGF2-ASQ6U949 168 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 NACC1Q96RE7 527 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 ZC3H12CQ9C0D7 883 aaKnown RBP10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 MCOLN1Q9GZU1 580 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 ABT1Q9ULW3 272 aaKnown RBP10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 ZBTB1Q9Y2K1 713 aa10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 SOS1Q07889 1333 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC12-221ENST00000489032 PRAMEF22A3QJZ6 481 aa10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 H0YIN7 160 aa10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 DDX3YO15523 660 aaKnown RBP10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 GSTP1P09211 210 aaKnown RBP10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 ECE1P42892 770 aa10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 DUSP27Q5VZP5 1158 aa10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 C2CD5Q86YS7 1000 aa10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 TMEM74Q96NL1 305 aa10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 MRPL18Q9H0U6 180 aaKnown RBP10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 TAF1DQ9H5J8 278 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 KBTBD4Q9NVX7 518 aa10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 AFDNP55196 1824 aaKnown RBP10.23□□□□□ -0.77
TRAPPC12-221ENST00000489032 F6X3S4 739 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 DLL1O00548 723 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 BMP6P22004 513 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 FOXD4L6Q3SYB3 417 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 MAP1SQ66K74 1059 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 FOXD4L3Q6VB84 417 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 ERMP1Q7Z2K6 904 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 ALYREFQ86V81 257 aaKnown RBP10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 ZNF654Q8IZM8 581 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 TSR2Q969E8 191 aaKnown RBP10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 RAD18Q9NS91 495 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 COL15A1P39059 1388 aa10.22□□□□□ -0.77
TRAPPC12-221ENST00000489032 LAMB4A4D0S4 1761 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 FER1L6Q2WGJ9 1857 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 ELL2O00472 640 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 EIF5P55010 431 aaKnown RBP10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 GRIK4Q16099 956 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 KRT24Q2M2I5 525 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 CCDC30Q5VVM6 783 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 AGMOQ6ZNB7 445 aa10.21□□□□□ -0.77
TRAPPC12-221ENST00000489032 ACAD11Q709F0 780 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms