RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 CCDC129Q6ZRS4 1044 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 ZNF365Q70YC5 407 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 ARMCX2Q7L311 632 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 FAM126BQ8IXS8 530 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
YIPF3-207ENST00000488966 MKL1Q969V6 931 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
YIPF3-207ENST00000488966 EPB41L4AQ9HCS5 686 aaPredicted RBP12.88□□□□□ -0.35
YIPF3-207ENST00000488966 PRDM1O75626 825 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 CYP2C18P33260 490 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 NKX3-2P78367 333 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
YIPF3-207ENST00000488966 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 KBTBD3Q8NAB2 608 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 APPBP2Q92624 585 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 ECHDC1Q9NTX5 307 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
YIPF3-207ENST00000488966 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
YIPF3-207ENST00000488966 GPAA1O43292 621 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 CD4P01730 458 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 OAZ1P54368 228 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 BEX3Q00994 111 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 TSHZ3Q63HK5 1081 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 PSRC1Q6PGN9 363 aaPredicted RBP12.86□□□□□ -0.35
YIPF3-207ENST00000488966 CXCL17Q6UXB2 119 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 MIER1Q8N108 512 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 GMCL1P1Q8NEA9 526 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 DDX49Q9Y6V7 483 aaKnown RBP12.86□□□□□ -0.35
YIPF3-207ENST00000488966 PLXNA1Q9UIW2 1896 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 MYH8P13535 1937 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
YIPF3-207ENST00000488966 ASTN1O14525 1302 aa12.86□□□□□ -0.35
YIPF3-207ENST00000488966 SOWAHBA6NEL2 793 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 M0R2C6 588 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 TNFRSF10AO00220 468 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 TLR3O15455 904 aaKnown RBP12.85□□□□□ -0.35
YIPF3-207ENST00000488966 RNF113AO15541 343 aaKnown RBP12.85□□□□□ -0.35
YIPF3-207ENST00000488966 TTLL1O95922 423 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 BMP3P12645 472 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 PTGS1P23219 599 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 TDO2P48775 406 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 TNFAIP2Q03169 654 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 ADGRE1Q14246 886 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 AKNAD1Q5T1N1 836 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 NOL8Q76FK4 1167 aaKnown RBP12.85□□□□□ -0.35
YIPF3-207ENST00000488966 SLC43A3Q8NBI5 491 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 HERVK_113Q902F9 699 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
YIPF3-207ENST00000488966 IL23AQ9NPF7 189 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 CXXC1Q9P0U4 656 aaPredicted RBP12.85□□□□□ -0.35
YIPF3-207ENST00000488966 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 GRIN2DO15399 1336 aa12.85□□□□□ -0.35
YIPF3-207ENST00000488966 TMEM232C9JQI7 657 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 APPP05067 770 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 CHMP4CQ96CF2 233 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
YIPF3-207ENST00000488966 ACAD9Q9H845 621 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 A1CFQ9NQ94 594 aaKnown RBP12.84□□□□□ -0.35
YIPF3-207ENST00000488966 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
YIPF3-207ENST00000488966 ZNF536O15090 1300 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 UMODL1Q5DID0 1318 aa12.84□□□□□ -0.35
YIPF3-207ENST00000488966 FDX1P10109 184 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 SMPD1P17405 629 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 GNAT2P19087 354 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 ITGA7Q13683 1181 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 RAB30Q15771 203 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 CCDC85BQ15834 202 aaPredicted RBP12.83□□□□□ -0.36
YIPF3-207ENST00000488966 FSCN1Q16658 493 aaKnown RBP12.83□□□□□ -0.36
YIPF3-207ENST00000488966 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 IFNL3Q8IZI9 196 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 NEDD1Q8NHV4 660 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 ATXN2LQ8WWM7 1075 aaKnown RBP12.83□□□□□ -0.36
YIPF3-207ENST00000488966 NKX2-4Q9H2Z4 354 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 HIPK3Q9H422 1215 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 MSRAQ9UJ68 235 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
YIPF3-207ENST00000488966 YBX2Q9Y2T7 364 aaKnown RBP12.83□□□□□ -0.36
YIPF3-207ENST00000488966 TTC28Q96AY4 2481 aa12.83□□□□□ -0.36
YIPF3-207ENST00000488966 PATL2C9JE40 543 aaKnown RBP12.82□□□□□ -0.36
YIPF3-207ENST00000488966 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
YIPF3-207ENST00000488966 FGBP02675 491 aa12.82□□□□□ -0.36
YIPF3-207ENST00000488966 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
YIPF3-207ENST00000488966 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
YIPF3-207ENST00000488966 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms