RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 A0A1W2PQD8 194 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 MINDY4BA8MYZ0 360 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 MEIS1O00470 390 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 POLR2BP30876 1174 aaKnown RBP5.38□□□□□ -1.55
CCDC93-209ENST00000488908 CCNFP41002 786 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 ZNF200P98182 395 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-209ENST00000488908 ZNF827Q17R98 1081 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 CDCP2Q5VXM1 449 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 TMC4Q7Z404 712 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 PCDHB14Q9Y5E9 798 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 TLR3O15455 904 aaKnown RBP5.37□□□□□ -1.55
CCDC93-209ENST00000488908 ATE1O95260 518 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 MSL3P1P0C860 447 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 OVOS1Q6IE37 1185 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 ZNF512BQ96KM6 892 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-209ENST00000488908 JMJD8Q96S16 334 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
CCDC93-209ENST00000488908 CNNM2Q9H8M5 875 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 AP5S1Q9NUS5 200 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 SUSD2Q9UGT4 822 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 PCDHB12Q9Y5F1 795 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 ROBO2Q9HCK4 1378 aa5.37□□□□□ -1.55
CCDC93-209ENST00000488908 SUPT5HO00267 1087 aaKnown RBP5.36□□□□□ -1.55
CCDC93-209ENST00000488908 VAV1P15498 845 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 GARTP22102 1010 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 CTSKP43235 329 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 VWA3BQ502W6 1294 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 NT5DC1Q5TFE4 455 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 LIPIQ6XZB0 460 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 LSRQ86X29 649 aaPredicted RBP5.36□□□□□ -1.55
CCDC93-209ENST00000488908 FAM161BQ96MY7 647 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 LRRC3Q9BY71 257 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 BRMS1Q9HCU9 246 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 GFOD1Q9NXC2 390 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 FBXL21Q9UKT6 434 aa5.36□□□□□ -1.55
CCDC93-209ENST00000488908 CYBBP04839 570 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 CEBPAP49715 358 aaPredicted RBP5.35□□□□□ -1.55
CCDC93-209ENST00000488908 PAQR3Q6TCH7 311 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 CRTC3Q6UUV7 619 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 NLRC3Q7RTR2 1065 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 NAT16Q8N8M0 369 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 FNIP1Q8TF40 1166 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 ATG4CQ96DT6 458 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 PRR13Q9NZ81 148 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 FAN1Q9Y2M0 1017 aa5.35□□□□□ -1.55
CCDC93-209ENST00000488908 A0A1W2PQJ5 194 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 PATL2C9JE40 543 aaKnown RBP5.34□□□□□ -1.55
CCDC93-209ENST00000488908 SRGAP3O43295 1099 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 SORBS3O60504 671 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 GSNP06396 782 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 MAGEA10P43363 369 aaPredicted RBP5.34□□□□□ -1.55
CCDC93-209ENST00000488908 FOXO4P98177 505 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 MVKQ03426 396 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 HLA-DQA1Q5Y7H0 255 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 SAPCD2Q86UD0 394 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 FERMT3Q86UX7 667 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 JAMLQ86YT9 394 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 ADGRG2Q8IZP9 1017 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 TMEM52Q8NDY8 209 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 SPATA25Q9BR10 227 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 DSCC1Q9BVC3 393 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 MRS2Q9HD23 443 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 SUPT16HQ9Y5B9 1047 aaKnown RBP5.34□□□□□ -1.55
CCDC93-209ENST00000488908 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
CCDC93-209ENST00000488908 A0A1B0GTL3 188 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 SH3D21A4FU49 640 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
CCDC93-209ENST00000488908 DBHP09172 617 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 FBLN1P23142 703 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 AUHQ13825 339 aaKnown RBP5.33□□□□□ -1.56
CCDC93-209ENST00000488908 FBXL19Q6PCT2 694 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 RNF38Q9H0F5 515 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 ANTXR1Q9H6X2 564 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 EHMT1Q9H9B1 1298 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 KCNQ5Q9NR82 932 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 KBTBD4Q9NVX7 518 aa5.33□□□□□ -1.56
CCDC93-209ENST00000488908 ITGAEP38570 1179 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 HTRA3P83110 453 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 RTP2Q5QGT7 225 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 CWF19L1Q69YN2 538 aaKnown RBP5.32□□□□□ -1.56
CCDC93-209ENST00000488908 BICRALQ6AI39 1079 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 CYP2R1Q6VVX0 501 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 TMEM192Q8IY95 271 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 SLC6A18Q96N87 628 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 VTI1BQ9UEU0 232 aa5.32□□□□□ -1.56
CCDC93-209ENST00000488908 GREM1O60565 184 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 GSTM1P09488 218 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 NCAM1P13591 858 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 ATF2P15336 505 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 TNFRSF1AP19438 455 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 CNR2P34972 360 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 EIF4A3P38919 411 aaKnown RBP5.31□□□□□ -1.56
CCDC93-209ENST00000488908 LRRFIP1Q32MZ4 808 aaKnown RBP5.31□□□□□ -1.56
CCDC93-209ENST00000488908 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
CCDC93-209ENST00000488908 SLC12A9Q9BXP2 914 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 PDLIM7Q9NR12 457 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 SMPD4Q9NXE4 827 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 DBR1Q9UK59 544 aaKnown RBP5.31□□□□□ -1.56
CCDC93-209ENST00000488908 HCFC2Q9Y5Z7 792 aa5.31□□□□□ -1.56
CCDC93-209ENST00000488908 F8W031 263 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms