RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CEP95Q96GE4 821 aa22.72■■□□□ 1.23
GGPS1-206ENST00000488594 A0A0U1RQG5 324 aaPredicted RBP22.71■■□□□ 1.23
GGPS1-206ENST00000488594 APPP05067 770 aa22.71■■□□□ 1.23
GGPS1-206ENST00000488594 ARMCX2Q7L311 632 aa22.71■■□□□ 1.23
GGPS1-206ENST00000488594 VTI1AQ96AJ9 217 aa22.71■■□□□ 1.23
GGPS1-206ENST00000488594 ZNF576Q9H609 170 aa22.71■■□□□ 1.23
GGPS1-206ENST00000488594 EPB41L4AQ9HCS5 686 aaPredicted RBP22.71■■□□□ 1.23
GGPS1-206ENST00000488594 RCAN3Q9UKA8 241 aa22.71■■□□□ 1.23
GGPS1-206ENST00000488594 CDH23Q9H251 3354 aa22.71■■□□□ 1.23
GGPS1-206ENST00000488594 ARVCFO00192 962 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 NKX3-2P78367 333 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 GRIN2CQ14957 1233 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 GNASQ5JWF2 1037 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 TMEM199Q8N511 208 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 TIFAQ96CG3 184 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 FGD4Q96M96 766 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.7■■□□□ 1.22
GGPS1-206ENST00000488594 NACAP1Q9BZK3 213 aa22.7■■□□□ 1.22
GGPS1-206ENST00000488594 EYSQ5T1H1 3165 aa22.69■■□□□ 1.22
GGPS1-206ENST00000488594 PLIN4Q96Q06 1357 aa22.69■■□□□ 1.22
GGPS1-206ENST00000488594 TLR3O15455 904 aaKnown RBP22.69■■□□□ 1.22
GGPS1-206ENST00000488594 PRDM1O75626 825 aa22.69■■□□□ 1.22
GGPS1-206ENST00000488594 BMP3P12645 472 aa22.69■■□□□ 1.22
GGPS1-206ENST00000488594 VCANP13611 3396 aa22.69■■□□□ 1.22
GGPS1-206ENST00000488594 PATL2C9JE40 543 aaKnown RBP22.68■■□□□ 1.22
GGPS1-206ENST00000488594 ADCY6O43306 1168 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 SLC3A2P08195 630 aaKnown RBP22.68■■□□□ 1.22
GGPS1-206ENST00000488594 TSPY3P0CV98 308 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 TSPY8P0CW00 308 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 PDE4BQ07343 736 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 SLFN13Q68D06 897 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 FAM126BQ8IXS8 530 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 CCDC144CPQ8IYA2 1237 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 LRRC47Q8N1G4 583 aaKnown RBP22.68■■□□□ 1.22
GGPS1-206ENST00000488594 NEDD1Q8NHV4 660 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 ACAD9Q9H845 621 aa22.68■■□□□ 1.22
GGPS1-206ENST00000488594 STAT2P52630 851 aa22.67■■□□□ 1.22
GGPS1-206ENST00000488594 PPP4R3BQ5MIZ7 849 aa22.67■■□□□ 1.22
GGPS1-206ENST00000488594 TMEM240Q5SV17 173 aa22.67■■□□□ 1.22
GGPS1-206ENST00000488594 PSRC1Q6PGN9 363 aaPredicted RBP22.67■■□□□ 1.22
GGPS1-206ENST00000488594 FAM160B2Q86V87 743 aa22.67■■□□□ 1.22
GGPS1-206ENST00000488594 IFNL3Q8IZI9 196 aa22.67■■□□□ 1.22
GGPS1-206ENST00000488594 KATNBL1Q9H079 304 aa22.67■■□□□ 1.22
GGPS1-206ENST00000488594 CSF2RAP15509 400 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 IRX5P78411 483 aaPredicted RBP22.66■■□□□ 1.22
GGPS1-206ENST00000488594 RASIP1Q5U651 963 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
GGPS1-206ENST00000488594 CCDC129Q6ZRS4 1044 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 FAM133AQ8N9E0 248 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 CHURC1Q8WUH1 139 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 GMCL1Q96IK5 515 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 DCTPP1Q9H773 170 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 HOMER2Q9NSB8 354 aa22.66■■□□□ 1.22
GGPS1-206ENST00000488594 ASB14A6NK59 587 aa22.65■■□□□ 1.22
GGPS1-206ENST00000488594 TMEM232C9JQI7 657 aa22.65■■□□□ 1.22
GGPS1-206ENST00000488594 M0R2C6 588 aa22.65■■□□□ 1.22
GGPS1-206ENST00000488594 CABYRO75952 493 aa22.65■■□□□ 1.22
GGPS1-206ENST00000488594 TKFCQ3LXA3 575 aa22.65■■□□□ 1.22
GGPS1-206ENST00000488594 C16orf59Q7L2K0 433 aa22.65■■□□□ 1.22
GGPS1-206ENST00000488594 CTAGE5O15320 804 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 CNTN2Q02246 1040 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 TNFAIP2Q03169 654 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 TSHZ3Q63HK5 1081 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 NOL8Q76FK4 1167 aaKnown RBP22.64■■□□□ 1.22
GGPS1-206ENST00000488594 STAG1Q8WVM7 1258 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 SEZ6LQ9BYH1 1024 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 PBX4Q9BYU1 374 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 A1CFQ9NQ94 594 aaKnown RBP22.64■■□□□ 1.22
GGPS1-206ENST00000488594 RNF146Q9NTX7 359 aa22.64■■□□□ 1.22
GGPS1-206ENST00000488594 ISY1Q9ULR0 285 aaKnown RBP22.64■■□□□ 1.22
GGPS1-206ENST00000488594 CD4P01730 458 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 SLC1A4P43007 532 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 TFAP4Q01664 338 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 IKQ13123 557 aaPredicted RBP22.63■■□□□ 1.21
GGPS1-206ENST00000488594 TJAP1Q5JTD0 557 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 C20orf194Q5TEA3 1177 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 GAS2L1Q99501 681 aaPredicted RBP22.63■■□□□ 1.21
GGPS1-206ENST00000488594 PPP1R12CQ9BZL4 782 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 NAPBQ9H115 298 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 MTIF3Q9H2K0 278 aaKnown RBP22.63■■□□□ 1.21
GGPS1-206ENST00000488594 PRDM6Q9NQX0 595 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 MYH4Q9Y623 1939 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 PRUNE2Q8WUY3 3088 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 PLA2G6O60733 806 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 ZNF365Q70YC5 407 aa22.63■■□□□ 1.21
GGPS1-206ENST00000488594 GNEQ9Y223 722 aaKnown RBP22.63■■□□□ 1.21
GGPS1-206ENST00000488594 ZNF536O15090 1300 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 TTC41PQ6P2S7 1318 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 ERC2O15083 957 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 ZEB2O60315 1214 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 PPARAQ07869 468 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 RAB30Q15771 203 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 CXCL17Q6UXB2 119 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 TLK2Q86UE8 772 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 USP38Q8NB14 1042 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 SLC43A3Q8NBI5 491 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 AGBL1Q96MI9 1066 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 AP5M1Q9H0R1 490 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 IL23AQ9NPF7 189 aa22.62■■□□□ 1.21
GGPS1-206ENST00000488594 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms