RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 FBXO40Q9UH90 709 aa14.66□□□□□ -0.06
TTC3-221ENST00000488522 MYADML2A6NDP7 307 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 CTAGE5O15320 804 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 FDX1P10109 184 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 GNAT2P19087 354 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
TTC3-221ENST00000488522 MKNK2Q9HBH9 465 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 ECHDC1Q9NTX5 307 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.65□□□□□ -0.06
TTC3-221ENST00000488522 MTMR4Q9NYA4 1195 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 FEM1BQ9UK73 627 aa14.65□□□□□ -0.06
TTC3-221ENST00000488522 ZHX1Q9UKY1 873 aaPredicted RBP14.65□□□□□ -0.06
TTC3-221ENST00000488522 ZBED4O75132 1171 aa14.64□□□□□ -0.07
TTC3-221ENST00000488522 ZFYP08048 801 aaPredicted RBP14.64□□□□□ -0.07
TTC3-221ENST00000488522 GRIN2CQ14957 1233 aa14.64□□□□□ -0.07
TTC3-221ENST00000488522 CCDC174Q6PII3 467 aa14.64□□□□□ -0.07
TTC3-221ENST00000488522 FAM126BQ8IXS8 530 aa14.64□□□□□ -0.07
TTC3-221ENST00000488522 SYMPKQ92797 1274 aaKnown RBP14.64□□□□□ -0.07
TTC3-221ENST00000488522 CEP95Q96GE4 821 aa14.64□□□□□ -0.07
TTC3-221ENST00000488522 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.64□□□□□ -0.07
TTC3-221ENST00000488522 ZNF287Q9HBT7 754 aa14.64□□□□□ -0.07
TTC3-221ENST00000488522 CHD7Q9P2D1 2997 aa14.64□□□□□ -0.07
TTC3-221ENST00000488522 A0A0U1RQG5 324 aaPredicted RBP14.63□□□□□ -0.07
TTC3-221ENST00000488522 ARVCFO00192 962 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 GPAA1O43292 621 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 RAD21O60216 631 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 ASGR1P07306 291 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 PPIGQ13427 754 aaKnown RBP eCLIP14.63□□□□□ -0.074e-6■■□□□ 12.9
TTC3-221ENST00000488522 CCDC144BQ3MJ40 725 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 TMEM240Q5SV17 173 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 C16orf59Q7L2K0 433 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 ARMCX2Q7L311 632 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 FAM133AQ8N9E0 248 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 SLC43A3Q8NBI5 491 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 SPC25Q9HBM1 224 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 CLIP2Q9UDT6 1046 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 BDP1A6H8Y1 2624 aa14.63□□□□□ -0.07
TTC3-221ENST00000488522 RNF113AO15541 343 aaKnown RBP14.62□□□□□ -0.07
TTC3-221ENST00000488522 PLA2G6O60733 806 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 TTLL1O95922 423 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 CD4P01730 458 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 C6orf222P0C671 652 aaPredicted RBP14.62□□□□□ -0.07
TTC3-221ENST00000488522 IRX5P78411 483 aaPredicted RBP14.62□□□□□ -0.07
TTC3-221ENST00000488522 PSRC1Q6PGN9 363 aaPredicted RBP14.62□□□□□ -0.07
TTC3-221ENST00000488522 CPXCR1Q8N123 301 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 ANKRD35Q8N283 1001 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 NEDD1Q8NHV4 660 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 KIFC2Q96AC6 838 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 TIFAQ96CG3 184 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 GMCL1Q96IK5 515 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 ZNF576Q9H609 170 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 RAVER2Q9HCJ3 691 aaKnown RBP14.62□□□□□ -0.07
TTC3-221ENST00000488522 PRDM6Q9NQX0 595 aa14.62□□□□□ -0.07
TTC3-221ENST00000488522 MINDY4BA8MYZ0 360 aa14.61□□□□□ -0.07
TTC3-221ENST00000488522 SMARCA5O60264 1052 aaPredicted RBP14.61□□□□□ -0.07
TTC3-221ENST00000488522 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
TTC3-221ENST00000488522 ZNF444Q8N0Y2 327 aaPredicted RBP14.61□□□□□ -0.07
TTC3-221ENST00000488522 USP38Q8NB14 1042 aa14.61□□□□□ -0.07
TTC3-221ENST00000488522 CRBNQ96SW2 442 aa14.61□□□□□ -0.07
TTC3-221ENST00000488522 SEZ6LQ9BYH1 1024 aa14.61□□□□□ -0.07
TTC3-221ENST00000488522 ASTN1O14525 1302 aa14.61□□□□□ -0.07
TTC3-221ENST00000488522 ZNF536O15090 1300 aa14.61□□□□□ -0.07
TTC3-221ENST00000488522 LCTP09848 1927 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 MYO9BQ13459 2157 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 TLR3O15455 904 aaKnown RBP14.6□□□□□ -0.07
TTC3-221ENST00000488522 CABYRO75952 493 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 BMP3P12645 472 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 CSF2RAP15509 400 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 STAT2P52630 851 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 TJAP1Q5JTD0 557 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 GNASQ5JWF2 1037 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 AKNAD1Q5T1N1 836 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 FAM160B2Q86V87 743 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 IFNL3Q8IZI9 196 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 TMEM199Q8N511 208 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 GPATCH3Q96I76 525 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 PBX4Q9BYU1 374 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 DCTPP1Q9H773 170 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 ACAD9Q9H845 621 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 A1CFQ9NQ94 594 aaKnown RBP14.6□□□□□ -0.07
TTC3-221ENST00000488522 GNEQ9Y223 722 aaKnown RBP14.6□□□□□ -0.07
TTC3-221ENST00000488522 TRANK1O15050 2925 aa14.6□□□□□ -0.07
TTC3-221ENST00000488522 PATL2C9JE40 543 aaKnown RBP14.59□□□□□ -0.07
TTC3-221ENST00000488522 M0R2C6 588 aa14.59□□□□□ -0.07
TTC3-221ENST00000488522 TDO2P48775 406 aa14.59□□□□□ -0.07
TTC3-221ENST00000488522 CNTN2Q02246 1040 aa14.59□□□□□ -0.07
TTC3-221ENST00000488522 SLFN13Q68D06 897 aa14.59□□□□□ -0.07
TTC3-221ENST00000488522 CCDC129Q6ZRS4 1044 aa14.59□□□□□ -0.07
TTC3-221ENST00000488522 LRRC47Q8N1G4 583 aaKnown RBP14.59□□□□□ -0.07
TTC3-221ENST00000488522 HERVK_113Q902F9 699 aa14.59□□□□□ -0.07
TTC3-221ENST00000488522 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
TTC3-221ENST00000488522 CTDP1Q9Y5B0 961 aaPredicted RBP14.59□□□□□ -0.07
TTC3-221ENST00000488522 SOWAHBA6NEL2 793 aa14.58□□□□□ -0.08
TTC3-221ENST00000488522 ASB14A6NK59 587 aa14.58□□□□□ -0.08
TTC3-221ENST00000488522 PRDM1O75626 825 aa14.58□□□□□ -0.08
TTC3-221ENST00000488522 NOVP48745 357 aa14.58□□□□□ -0.08
TTC3-221ENST00000488522 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
TTC3-221ENST00000488522 PDE4BQ07343 736 aa14.58□□□□□ -0.08
TTC3-221ENST00000488522 LRRFIP1Q32MZ4 808 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms