RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 HOMEZQ8IX15 550 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 TRMT2AQ8IZ69 625 aaKnown RBP7.42□□□□□ -1.22
CDHR3-213ENST00000488386 CERS5Q8N5B7 392 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 AGBL3Q8NEM8 1001 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 DCPSQ96C86 337 aaKnown RBP7.42□□□□□ -1.22
CDHR3-213ENST00000488386 NSUN5Q96P11 429 aaKnown RBP7.42□□□□□ -1.22
CDHR3-213ENST00000488386 ANKRD2Q9GZV1 360 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 COA1Q9GZY4 146 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 ELP3Q9H9T3 547 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 CD209Q9NNX6 404 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 MYOZ2Q9NPC6 264 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 CNTN3Q9P232 1028 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 FZD1Q9UP38 647 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 FNDC3AQ9Y2H6 1198 aaKnown RBP7.42□□□□□ -1.22
CDHR3-213ENST00000488386 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 AOX1Q06278 1338 aa7.42□□□□□ -1.22
CDHR3-213ENST00000488386 THSD7BQ9C0I4 1608 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 IGHA2P01877 340 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 AMPD1P23109 780 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 DGKGP49619 791 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 LBX1P52954 281 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 HUNKP57058 714 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 ZNF280AP59817 542 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-213ENST00000488386 GPLD1P80108 840 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 PLAURQ03405 335 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 PRKG1Q13976 671 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
CDHR3-213ENST00000488386 PDE12Q6L8Q7 609 aaKnown RBP7.41□□□□□ -1.22
CDHR3-213ENST00000488386 HFE2Q6ZVN8 426 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 OR13H1Q8NG92 308 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 CDCA5Q96FF9 252 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 USP44Q9H0E7 712 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 ABI2Q9NYB9 513 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-213ENST00000488386 FOXD3Q9UJU5 478 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-213ENST00000488386 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 PTPRCP08575 1304 aa7.41□□□□□ -1.22
CDHR3-213ENST00000488386 WNT10BO00744 389 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 BCAR3O75815 825 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 HSPA8P11142 646 aaKnown RBP7.4□□□□□ -1.22
CDHR3-213ENST00000488386 HOXD8P13378 290 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-213ENST00000488386 CPB1P15086 417 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 NRLP54845 237 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 GRIK5Q16478 980 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 ALDH1L2Q3SY69 923 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 STRIP1Q5VSL9 837 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 KCTD17Q8N5Z5 321 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 C1orf127Q8N9H9 656 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 FAM129BQ96TA1 746 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 CHRDQ9H2X0 955 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 GBA2Q9HCG7 927 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-213ENST00000488386 ENAMQ9NRM1 1142 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 KANSL3Q9P2N6 904 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 UTYO14607 1347 aa7.4□□□□□ -1.22
CDHR3-213ENST00000488386 ZNF609O15014 1411 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 CNTNAP5Q8WYK1 1306 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 CLRN2A0PK11 232 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 J3QW42 95 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 GPR182O15218 404 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 NDUFB5O43674 189 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 PSAPP07602 524 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 PCSK2P16519 638 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 SOX18P35713 384 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 RARSP54136 660 aaKnown RBP7.39□□□□□ -1.23
CDHR3-213ENST00000488386 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDHR3-213ENST00000488386 CHAF1AQ13111 956 aaPredicted RBP7.39□□□□□ -1.23
CDHR3-213ENST00000488386 RABL6Q3YEC7 729 aaPredicted RBP7.39□□□□□ -1.23
CDHR3-213ENST00000488386 METTL24Q5JXM2 366 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 FAM35AQ86V20 835 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 MEIS3Q99687 375 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 LPIN3Q9BQK8 851 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 SIL1Q9H173 461 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 PA2G4Q9UQ80 394 aaKnown RBP7.39□□□□□ -1.23
CDHR3-213ENST00000488386 RIPOR2Q9Y4F9 1068 aa7.39□□□□□ -1.23
CDHR3-213ENST00000488386 FAM155AB1AL88 458 aaPredicted RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 UBE2Q2LH0YL09 131 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 M0R082 166 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 TNFRSF21O75509 655 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 RPLP1P05386 114 aaKnown RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 IL1R1P14778 569 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 ALAS2P22557 587 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 ECE1P42892 770 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 USP5P45974 858 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 RFX5P48382 616 aaPredicted RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 CTCFP49711 727 aaPredicted RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 PERM1Q5SV97 790 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 PSAPL1Q6NUJ1 521 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 RGMBQ6NW40 437 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 LINC00114Q6XXX2 140 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 ZNF804AQ7Z570 1209 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 MICALL1Q8N3F8 863 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 C2orf69Q8N8R5 385 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 ZNF417Q8TAU3 575 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 NUDT8Q8WV74 236 aa7.38□□□□□ -1.23
CDHR3-213ENST00000488386 FRAT1Q92837 279 aaPredicted RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 FAM84BQ96KN1 310 aaPredicted RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 ZNF587Q96SQ5 575 aaPredicted RBP7.38□□□□□ -1.23
CDHR3-213ENST00000488386 LRRFIP2Q9Y608 721 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms