RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 CLTBP09497 229 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
VAMP7-206ENST00000488344 TLE2Q04725 743 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 ANKRD45Q5TZF3 282 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 SEC62Q99442 399 aaKnown RBP13.31□□□□□ -0.28
VAMP7-206ENST00000488344 STARD7Q9NQZ5 370 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 HELLSQ9NRZ9 838 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.31□□□□□ -0.28
VAMP7-206ENST00000488344 STX8Q9UNK0 236 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 MROH7Q68CQ1 1323 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 ADAMTS4O75173 837 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-206ENST00000488344 RAG1P15918 1043 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 CST5P28325 142 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-206ENST00000488344 ACVR2BQ13705 512 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 Q7L0L9 218 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 OTUD7AQ8TE49 926 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-206ENST00000488344 BADQ92934 168 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 GLT1D1Q96MS3 346 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 TOX2Q96NM4 488 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
VAMP7-206ENST00000488344 ELP1O95163 1332 aa13.3□□□□□ -0.28
VAMP7-206ENST00000488344 ASB14A6NK59 587 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 RANBP6O60518 1105 aaKnown RBP13.29□□□□□ -0.28
VAMP7-206ENST00000488344 PQBP1O60828 265 aaKnown RBP13.29□□□□□ -0.28
VAMP7-206ENST00000488344 ACLYP53396 1101 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
VAMP7-206ENST00000488344 ALX1Q15699 326 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 CCDC174Q6PII3 467 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 ARMCX2Q7L311 632 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 ANKRD33Q7Z3H0 272 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 HOMER2Q9NSB8 354 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 RNF146Q9NTX7 359 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 PNMA2Q9UL42 364 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 SZT2Q5T011 3432 aa13.29□□□□□ -0.28
VAMP7-206ENST00000488344 LAMA3Q16787 3333 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 PARP14Q460N5 1801 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 TRIM43BA6NCK2 446 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 ORC4O43929 436 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 C6orf222P0C671 652 aaPredicted RBP13.28□□□□□ -0.28
VAMP7-206ENST00000488344 PCP11498 1178 aaKnown RBP13.28□□□□□ -0.28
VAMP7-206ENST00000488344 MCCP23508 829 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 PDE1AP54750 535 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
VAMP7-206ENST00000488344 SMAD3P84022 425 aaKnown RBP13.28□□□□□ -0.28
VAMP7-206ENST00000488344 KLHDC9Q8NEP7 349 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 DCAF4Q8WV16 495 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 TRIM43Q96BQ3 446 aaPredicted RBP13.28□□□□□ -0.28
VAMP7-206ENST00000488344 UPF3AQ9H1J1 476 aaKnown RBP13.28□□□□□ -0.28
VAMP7-206ENST00000488344 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 TMEM39AQ9NV64 488 aa13.28□□□□□ -0.28
VAMP7-206ENST00000488344 A0A0U1RQG5 324 aaPredicted RBP13.27□□□□□ -0.29
VAMP7-206ENST00000488344 NT5C2P49902 561 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 GJA9P57773 515 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 FPGSQ05932 587 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 CTDSPL2Q05D32 466 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 SHHQ15465 462 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 KCNA10Q16322 511 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 MCMDC2Q4G0Z9 681 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 VTI1AQ96AJ9 217 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 LENG1Q96BZ8 264 aaPredicted RBP13.27□□□□□ -0.29
VAMP7-206ENST00000488344 TRERF1Q96PN7 1200 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 SEZ6LQ9BYH1 1024 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
VAMP7-206ENST00000488344 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 TLR3O15455 904 aaKnown RBP13.26□□□□□ -0.29
VAMP7-206ENST00000488344 ZEB2O60315 1214 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 CABYRO75952 493 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 ALAS1P13196 640 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 GNASQ5JWF2 1037 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 CCSAPQ6IQ19 270 aaPredicted RBP13.26□□□□□ -0.29
VAMP7-206ENST00000488344 KCTD1Q719H9 257 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 NOL8Q76FK4 1167 aaKnown RBP13.26□□□□□ -0.29
VAMP7-206ENST00000488344 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
VAMP7-206ENST00000488344 RNPC3Q96LT9 517 aaKnown RBP13.26□□□□□ -0.29
VAMP7-206ENST00000488344 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 A1CFQ9NQ94 594 aaKnown RBP13.26□□□□□ -0.29
VAMP7-206ENST00000488344 TCP11L1Q9NUJ3 509 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 CCPG1Q9ULG6 757 aa13.26□□□□□ -0.29
VAMP7-206ENST00000488344 ZNF536O15090 1300 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 LOC102724159A0A0B4J2E5 919 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 DLL1O00548 723 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 FOXP2O15409 715 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 ICAM1P05362 532 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 ASGR1P07306 291 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms