RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 SYT1P21579 422 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 TCP10Q12799 353 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 RTN1Q16799 776 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 FAM110CQ1W6H9 321 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 SLC44A5Q8NCS7 719 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 ANKS1AQ92625 1134 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 CCDC17Q96LX7 622 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 C1QTNF1Q9BXJ1 281 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 RBM28Q9NW13 759 aaKnown RBP13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 PLIN4Q96Q06 1357 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 GOLGA6L22H0YM25 854 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 JAK2O60674 1132 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 NFKBIBQ15653 356 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 RAB11FIP4Q86YS3 637 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 FAM151AQ8WW52 585 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 SNX27Q96L92 541 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 ASB2Q96Q27 587 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 KAT14Q9H8E8 782 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 SENP2Q9HC62 589 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 PRKAG2Q9UGJ0 569 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 ATP6V1DQ9Y5K8 247 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 ZHX2Q9Y6X8 837 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 LTBP2Q14767 1821 aa13.98□□□□□ -0.17
HLA-DOB-209ENST00000488325 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 DDX11L8A8MPP1 907 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 H3BQV1 296 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 ZSCAN22P10073 491 aaPredicted RBP13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 GRIN2CQ14957 1233 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 CLEC17AQ6ZS10 378 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 CTCFLQ8NI51 663 aaPredicted RBP13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 NUP133Q8WUM0 1156 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 DDX11Q96FC9 970 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 MAP3K14Q99558 947 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 HCN4Q9Y3Q4 1203 aa13.97□□□□□ -0.17
HLA-DOB-209ENST00000488325 STK36Q9NRP7 1315 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 DDTLA6NHG4 134 aaPredicted RBP13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 KIF5BP33176 963 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 PKP1Q13835 747 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 LHX8Q68G74 356 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 ZFPM1Q8IX07 1006 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 TRIM22Q8IYM9 498 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 FANCBQ8NB91 859 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 WASF1Q92558 559 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 MYL10Q9BUA6 226 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 THEGQ9P2T0 379 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 HERC5Q9UII4 1024 aaKnown RBP13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 MTMR6Q9Y217 621 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 ZDHHC9Q9Y397 364 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 AFG3L2Q9Y4W6 797 aa13.96□□□□□ -0.17
HLA-DOB-209ENST00000488325 NMT2O60551 498 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 F13A1P00488 732 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 IFNAR1P17181 557 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 PTPRAP18433 802 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 RXRAP19793 462 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 CYP2B6P20813 491 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 CDC27P30260 824 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 MCM4P33991 863 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 SHMT1P34896 483 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 ADD1P35611 737 aaKnown RBP13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 GNAQP50148 359 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 AKAP17AQ02040 695 aaKnown RBP13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 SSRP1Q08945 709 aaKnown RBP13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 METTL16Q86W50 562 aaKnown RBP13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 SCYL3Q8IZE3 742 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 PICK1Q9NRD5 415 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 AGTPBP1Q9UPW5 1226 aa13.95□□□□□ -0.18
HLA-DOB-209ENST00000488325 PLXNB2O15031 1838 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 PTPRFP10586 1907 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 TOP1P11387 765 aaKnown RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 MRPS5P82675 430 aaKnown RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 CACNB2Q08289 660 aaPredicted RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 TROAPQ12815 778 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 FOXD4L5Q5VV16 416 aaPredicted RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 RCSD1Q6JBY9 416 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 SH3BP5LQ7L8J4 393 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 PNMA1Q8ND90 353 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 FOXD4L4Q8WXT5 416 aaPredicted RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 PPM1EQ8WY54 764 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 FAM217BQ9NTX9 383 aaPredicted RBP13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
HLA-DOB-209ENST00000488325 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 TRIM75PA6NK02 468 aa13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 PHF20L1A8MW92 1017 aa13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 AKR1B1P15121 316 aa13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 CCND3P30281 292 aaPredicted RBP13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 NOVP48745 357 aa13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 NTRK3Q16288 839 aa13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 CERKLQ49MI3 558 aaPredicted RBP13.93□□□□□ -0.18
HLA-DOB-209ENST00000488325 TREML2Q5T2D2 321 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms