RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 NAV1Q8NEY1 1877 aa9.4□□□□□ -0.91
NECTIN3-209ENST00000488016 DDX60LQ5H9U9 1706 aaKnown RBP9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 TTC41PQ6P2S7 1318 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 CYP2D7A0A087X1C5 515 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 SPATA31C2B4DYI2 1134 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 ENTPD3O75355 529 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 BAG3O95817 575 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 IL2RAP01589 272 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 IREB2P48200 963 aaKnown RBP9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 JAG1P78504 1218 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 AAMPQ13685 434 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 TTF1Q15361 905 aaPredicted RBP9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 PLEKHM2Q8IWE5 1019 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 OSBP2Q969R2 916 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 OPTNQ96CV9 577 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 ZNF341Q9BYN7 854 aa9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 CUEDC1Q9NWM3 386 aaPredicted RBP9.39□□□□□ -0.91
NECTIN3-209ENST00000488016 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 GLRX3O76003 335 aaKnown RBP9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 USP5P45974 858 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 CENPCQ03188 943 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 GNASQ5JWF2 1037 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 ANKRD13AQ8IZ07 590 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 FSD1Q9BTV5 496 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 R3HDMLQ9H3Y0 253 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 TIMMDC1Q9NPL8 285 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 STAP2Q9UGK3 403 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 MYH1P12882 1939 aa9.38□□□□□ -0.91
NECTIN3-209ENST00000488016 BAZ2AQ9UIF9 1905 aaKnown RBP9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 RNF113AO15541 343 aaKnown RBP9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 RAD21O60216 631 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 GDF11O95390 407 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 PLCD1P51178 756 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 NOGQ13253 232 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 DCAF15Q66K64 600 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 STK11IPQ8N1F8 1099 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 CSADQ9Y600 493 aa9.37□□□□□ -0.91
NECTIN3-209ENST00000488016 IGF2BP3O00425 579 aaKnown RBP eCLIP9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 ERC2O15083 957 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 TRPA1O75762 1119 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 GSPT1P15170 499 aaKnown RBP9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 MAP2K2P36507 400 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 UBE3CQ15386 1083 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 SLC44A5Q8NCS7 719 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 DYNLL2Q96FJ2 89 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 FAM227BQ96M60 508 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 PTPN18Q99952 460 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 ANP32EQ9BTT0 268 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 EPB41L4AQ9HCS5 686 aaPredicted RBP9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 DCP1AQ9NPI6 582 aaPredicted RBP9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 RNF186Q9NXI6 227 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 ZNF112Q9UJU3 913 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 SLC4A4Q9Y6R1 1079 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 DOCK1Q14185 1865 aa9.36□□□□□ -0.91
NECTIN3-209ENST00000488016 ATAD5Q96QE3 1844 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 COL2A1P02458 1487 aaPredicted RBP9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 A0A0D9SFI3 127 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 GPAA1O43292 621 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 TBC1D8O95759 1140 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 BRI3BPQ8WY22 251 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 APPBP2Q92624 585 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 RILPL2Q969X0 211 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 CRNKL1Q9BZJ0 848 aaKnown RBP9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 MCM9Q9NXL9 1143 aa9.35□□□□□ -0.91
NECTIN3-209ENST00000488016 PHIPQ8WWQ0 1821 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 FOXP2O15409 715 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 F11P03951 625 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 POLR3DP05423 398 aaPredicted RBP9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 MAP3K10Q02779 954 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 NMIQ13287 307 aaPredicted RBP9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 DBN1Q16643 649 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 CCL15Q16663 113 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 ZMYM1Q5SVZ6 1142 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 VPS53Q5VIR6 699 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 ZSCAN25Q6NSZ9 544 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 ZNF589Q86UQ0 364 aaPredicted RBP9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 CLEC10AQ8IUN9 316 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 SCYL3Q8IZE3 742 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 FAM43AQ8N2R8 423 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 CRACR2BQ8N4Y2 399 aaPredicted RBP9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 STRBPQ96SI9 672 aaKnown RBP9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 IL25Q9H293 177 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 HRH3Q9Y5N1 445 aa9.34□□□□□ -0.91
NECTIN3-209ENST00000488016 TRIM75PA6NK02 468 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms