RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ARSHQ5FYA8 562 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 TTC6Q86TZ1 520 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 RNF141Q8WVD5 230 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 KREMEN1Q96MU8 473 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 TRIT1Q9H3H1 467 aaKnown RBP7.43□□□□□ -1.22
BRCA1-217ENST00000487825 GPATCH2Q9NW75 528 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 ROBO2Q9HCK4 1378 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 MROH1Q8NDA8 1641 aa7.42□□□□□ -1.22
BRCA1-217ENST00000487825 EIF2AK4Q9P2K8 1649 aaKnown RBP7.42□□□□□ -1.22
BRCA1-217ENST00000487825 GDNFP39905 211 aa7.42□□□□□ -1.22
BRCA1-217ENST00000487825 CHMP4BP1P59074 171 aa7.42□□□□□ -1.22
BRCA1-217ENST00000487825 RALGPS1Q5JS13 557 aa7.42□□□□□ -1.22
BRCA1-217ENST00000487825 LDLRAD1Q5T700 205 aa7.42□□□□□ -1.22
BRCA1-217ENST00000487825 LRRC3Q9BY71 257 aa7.42□□□□□ -1.22
BRCA1-217ENST00000487825 MBD5Q9P267 1494 aa7.42□□□□□ -1.22
BRCA1-217ENST00000487825 SPHKAPQ2M3C7 1700 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 ZNF503-AS2A6NEH8 195 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 KIF3BO15066 747 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 C8AP07357 584 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 SRFP11831 508 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 RAG1P15918 1043 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 MCM4P33991 863 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 HK2P52789 917 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 APOBRQ0VD83 1088 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 GAB4Q2WGN9 574 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 GK5Q6ZS86 529 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 LIN37Q96GY3 246 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-217ENST00000487825 KIRREL1Q96J84 757 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 GPR62Q9BZJ7 368 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 ADAMTS10Q9H324 1103 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.41□□□□□ -1.22
BRCA1-217ENST00000487825 DUSP13Q9UII6 198 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 MARF1Q9Y4F3 1742 aaKnown RBP7.41□□□□□ -1.22
BRCA1-217ENST00000487825 BRWD3Q6RI45 1802 aa7.41□□□□□ -1.22
BRCA1-217ENST00000487825 LRRC10BA6NIK2 292 aa7.4□□□□□ -1.22
BRCA1-217ENST00000487825 CLCQ05315 142 aa7.4□□□□□ -1.22
BRCA1-217ENST00000487825 TSPYL5Q86VY4 417 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-217ENST00000487825 BACH2Q9BYV9 841 aa7.4□□□□□ -1.22
BRCA1-217ENST00000487825 GMIPQ9P107 970 aa7.4□□□□□ -1.22
BRCA1-217ENST00000487825 SETD5Q9C0A6 1442 aa7.4□□□□□ -1.22
BRCA1-217ENST00000487825 BCL9LQ86UU0 1499 aa7.4□□□□□ -1.22
BRCA1-217ENST00000487825 EFCAB6Q5THR3 1501 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 EEA1Q15075 1411 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 TMEM2Q9UHN6 1383 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 RGS13O14921 159 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 UBOX5O94941 541 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 ATE1O95260 518 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 POLR2BP30876 1174 aaKnown RBP7.39□□□□□ -1.23
BRCA1-217ENST00000487825 ERVFC1P60507 584 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 EGR3Q06889 387 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 ZNF124Q15973 351 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 MLANAQ16655 118 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 TMEM67Q5HYA8 995 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 OVOS1Q6IE37 1185 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 CCDC120Q96HB5 630 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 ASPNQ9BXN1 380 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 TMEM59LQ9UK28 342 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 EID1Q9Y6B2 187 aa7.39□□□□□ -1.23
BRCA1-217ENST00000487825 MYO5BQ9ULV0 1848 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 UNC13BO14795 1591 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 ASXL1Q8IXJ9 1541 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 CASKIN1Q8WXD9 1431 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 NCOA3Q9Y6Q9 1424 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-217ENST00000487825 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-217ENST00000487825 GLI1P08151 1106 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 ZNF76P36508 570 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 MPZL3Q6UWV2 235 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 HOMEZQ8IX15 550 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 NKD1Q969G9 470 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 SPON2Q9BUD6 331 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 ANTXR1Q9H6X2 564 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 PCDHA11Q9Y5I1 949 aa7.38□□□□□ -1.23
BRCA1-217ENST00000487825 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.38□□□□□ -1.23
BRCA1-217ENST00000487825 CCDC141Q6ZP82 1450 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 BLMP54132 1417 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-217ENST00000487825 BTBD11A6QL63 1104 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 YY1P25490 414 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 CLEC16AQ2KHT3 1053 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 KIAA0825Q8IV33 1275 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 ATG4CQ96DT6 458 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 EAF1Q96JC9 268 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-217ENST00000487825 C8orf37Q96NL8 207 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 FAM53CQ9NYF3 392 aa7.37□□□□□ -1.23
BRCA1-217ENST00000487825 RAC2P15153 192 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 ZNF165P49910 485 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 PRR23BQ6ZRT6 265 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 USP48Q86UV5 1035 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 KSR1Q8IVT5 923 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 ABHD4Q8TB40 342 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 VWCEQ96DN2 955 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 NT5C1AQ9BXI3 368 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 CFDP1Q9UEE9 299 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-217ENST00000487825 PCDHGB7Q9Y5F8 929 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 FYCO1Q9BQS8 1478 aa7.36□□□□□ -1.23
BRCA1-217ENST00000487825 ATRNO75882 1429 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 LAMC1P11047 1609 aa7.35□□□□□ -1.23
BRCA1-217ENST00000487825 TRHRP34981 398 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms