RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TLR3O15455 904 aaKnown RBP6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 SIGLEC6O43699 453 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 CTSHP09668 335 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 ZNF76P36508 570 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 SLURP1P55000 103 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 ZNF200P98182 395 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 PWP1Q13610 501 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 MLECQ14165 292 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 MPP2Q14168 576 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 PLEKHN1Q494U1 663 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 HS2ST1Q7LGA3 356 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 SLCO6A1Q86UG4 719 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 RELL1Q8IUW5 271 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 TMEM74Q96NL1 305 aa6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 KIAA1522Q9P206 1035 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P36-201ENST00000487709 RECKO95980 971 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 HHIPL2Q6UWX4 724 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 LSRQ86X29 649 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 ADGRG2Q8IZP9 1017 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 RNF34Q969K3 372 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 GPR20Q99678 358 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 BACH2Q9BYV9 841 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 CHST7Q9NS84 486 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 IMPACTQ9P2X3 320 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 USP31Q70CQ4 1352 aa6.04□□□□□ -1.44
HMGB1P36-201ENST00000487709 UBXN11Q5T124 520 aa6.03□□□□□ -1.44
HMGB1P36-201ENST00000487709 OVOS1Q6IE37 1185 aa6.03□□□□□ -1.44
HMGB1P36-201ENST00000487709 USP40Q9NVE5 1235 aa6.03□□□□□ -1.44
HMGB1P36-201ENST00000487709 A0A1B0GTL3 188 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 A0A1W2PQ45 241 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 A0A1W2PQY0 241 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 K7ESM1 405 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 PFKLP17858 780 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 ZC3H14Q6PJT7 736 aaKnown RBP6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 FERMT3Q86UX7 667 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 NLGN1Q8N2Q7 840 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 JMJD8Q96S16 334 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 SPATA25Q9BR10 227 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 AP5S1Q9NUS5 200 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 GFOD1Q9NXC2 390 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 GMIPQ9P107 970 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 ACSL6Q9UKU0 697 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 PCDHB14Q9Y5E9 798 aa6.02□□□□□ -1.45
HMGB1P36-201ENST00000487709 A0A1W2PQ27 194 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 A0A1W2PQ64 194 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 A0A1W2PQC6 194 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 A0A1W2PQD8 194 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 CLEC3AO75596 197 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 IGFBP6P24592 240 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 CTSKP43235 329 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 CEBPAP49715 358 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 CBX2Q14781 532 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 NT5DC1Q5TFE4 455 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 CRTC3Q6UUV7 619 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 MKRN2Q9H000 416 aaKnown RBP6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 SUSD2Q9UGT4 822 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 GGT7Q9UJ14 662 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 HCFC2Q9Y5Z7 792 aa6.01□□□□□ -1.45
HMGB1P36-201ENST00000487709 ZNF205O95201 554 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 ENDOUP21128 410 aaKnown RBP6□□□□□ -1.45
HMGB1P36-201ENST00000487709 ERCC5P28715 1186 aaPredicted RBP6□□□□□ -1.45
HMGB1P36-201ENST00000487709 MAPKAPK2P49137 400 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 RAD51AP2Q09MP3 1159 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 GNL2Q13823 731 aaKnown RBP6□□□□□ -1.45
HMGB1P36-201ENST00000487709 ZNF827Q17R98 1081 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 CWF19L2Q2TBE0 894 aaKnown RBP6□□□□□ -1.45
HMGB1P36-201ENST00000487709 FAM196AQ6ZSG2 479 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 NAT16Q8N8M0 369 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 EAF1Q96JC9 268 aaPredicted RBP6□□□□□ -1.45
HMGB1P36-201ENST00000487709 CCSER2Q9H7U1 834 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 BRMS1Q9HCU9 246 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 FBXL21Q9UKT6 434 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 PALD1Q9ULE6 856 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 PLA2G2DQ9UNK4 145 aa6□□□□□ -1.45
HMGB1P36-201ENST00000487709 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 MSL3P1P0C860 447 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 GARTP22102 1010 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 BMP8BP34820 402 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 NR1I3Q14994 352 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 VWA3BQ502W6 1294 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 LIPIQ6XZB0 460 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 RSRP1Q9BUV0 290 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 MYRFQ9Y2G1 1151 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 PCDHB12Q9Y5F1 795 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 IRS2Q9Y4H2 1338 aa5.99□□□□□ -1.45
HMGB1P36-201ENST00000487709 VAV1P15498 845 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 FANCCQ00597 558 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 MVKQ03426 396 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 ZFYVE27Q5T4F4 411 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 TMEM52Q8NDY8 209 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 FNIP1Q8TF40 1166 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 FAN1Q9Y2M0 1017 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 PMF1-BGLAPU3KQ54 211 aa5.98□□□□□ -1.45
HMGB1P36-201ENST00000487709 FOXO4P98177 505 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 CAP1Q01518 475 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 TARBP2Q15633 366 aaKnown RBP5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 CDCP2Q5VXM1 449 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 NLRC3Q7RTR2 1065 aa5.97□□□□□ -1.45
HMGB1P36-201ENST00000487709 USP48Q86UV5 1035 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms