RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CCDC144BQ3MJ40 725 aa14.34□□□□□ -0.11
TRIM56-204ENST00000487252 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
TRIM56-204ENST00000487252 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
TRIM56-204ENST00000487252 FAM86C1Q9NVL1 165 aa14.34□□□□□ -0.11
TRIM56-204ENST00000487252 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
TRIM56-204ENST00000487252 MCM3APO60318 1980 aa14.34□□□□□ -0.11
TRIM56-204ENST00000487252 DNAH14Q0VDD8 3507 aa14.34□□□□□ -0.11
TRIM56-204ENST00000487252 FLOT1O75955 427 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 ACTN1P12814 892 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 ARID4AP29374 1257 aaPredicted RBP14.33□□□□□ -0.12
TRIM56-204ENST00000487252 ERVK-21P61565 698 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 IRF2BPLQ9H1B7 796 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 ABHD16BQ9H3Z7 469 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 MUTYHQ9UIF7 546 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 ZNF214Q9UL59 606 aaPredicted RBP14.33□□□□□ -0.12
TRIM56-204ENST00000487252 ASTN1O14525 1302 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 TET1Q8NFU7 2136 aa14.33□□□□□ -0.12
TRIM56-204ENST00000487252 BAHCC1Q9P281 2608 aa14.32□□□□□ -0.12
TRIM56-204ENST00000487252 H3BQ06 376 aaPredicted RBP14.32□□□□□ -0.12
TRIM56-204ENST00000487252 SEPT2Q15019 361 aa14.32□□□□□ -0.12
TRIM56-204ENST00000487252 NAA16Q6N069 864 aaPredicted RBP14.32□□□□□ -0.12
TRIM56-204ENST00000487252 MAGEB6Q8N7X4 407 aa14.32□□□□□ -0.12
TRIM56-204ENST00000487252 KATNBL1Q9H079 304 aa14.32□□□□□ -0.12
TRIM56-204ENST00000487252 COPRSQ9NQ92 184 aa14.32□□□□□ -0.12
TRIM56-204ENST00000487252 FAM50BQ9Y247 325 aa14.32□□□□□ -0.12
TRIM56-204ENST00000487252 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 DMXL1Q9Y485 3027 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 COL4A6Q14031 1691 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 RFC2P35250 354 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 COPB2P35606 906 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 MCAMP43121 646 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 ID4P47928 161 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 BEX3Q00994 111 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 ASCL5Q7RTU5 278 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 DEFB128Q7Z7B8 93 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 REPS2Q8NFH8 660 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 PBXIP1Q96AQ6 731 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.31□□□□□ -0.12
TRIM56-204ENST00000487252 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 PA2G4Q9UQ80 394 aaKnown RBP14.31□□□□□ -0.12
TRIM56-204ENST00000487252 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
TRIM56-204ENST00000487252 ZNF292O60281 2723 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 WDR87Q6ZQQ6 2873 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 TMEM221A6NGB7 291 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 M0R296 226 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 BAIAP3O94812 1187 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 STAT3P40763 770 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 RNF135Q8IUD6 432 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 SIAH1Q8IUQ4 282 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 FBXL6Q8N531 539 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
TRIM56-204ENST00000487252 FGD4Q96M96 766 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 ALDH8A1Q9H2A2 487 aaPredicted RBP14.3□□□□□ -0.12
TRIM56-204ENST00000487252 AKAP2Q9Y2D5 859 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.3□□□□□ -0.12
TRIM56-204ENST00000487252 TNKSO95271 1327 aa14.3□□□□□ -0.12
TRIM56-204ENST00000487252 MYO5AQ9Y4I1 1855 aaKnown RBP14.29□□□□□ -0.12
TRIM56-204ENST00000487252 NCOR2Q9Y618 2525 aa14.29□□□□□ -0.12
TRIM56-204ENST00000487252 PRR23AA6NEV1 266 aa14.29□□□□□ -0.12
TRIM56-204ENST00000487252 VWA5AO00534 786 aa14.29□□□□□ -0.12
TRIM56-204ENST00000487252 IGSF3O75054 1194 aa14.29□□□□□ -0.12
TRIM56-204ENST00000487252 GABPAQ06546 454 aa14.29□□□□□ -0.12
TRIM56-204ENST00000487252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRIM56-204ENST00000487252 TGS1Q96RS0 853 aaKnown RBP14.29□□□□□ -0.12
TRIM56-204ENST00000487252 GNEQ9Y223 722 aaKnown RBP14.29□□□□□ -0.12
TRIM56-204ENST00000487252 TPRP12270 2363 aaKnown RBP14.29□□□□□ -0.12
TRIM56-204ENST00000487252 SMAD2Q15796 467 aaKnown RBP14.28□□□□□ -0.12
TRIM56-204ENST00000487252 CFAP47Q6ZTR5 3102 aa14.28□□□□□ -0.12
TRIM56-204ENST00000487252 SUGP1Q8IWZ8 645 aaKnown RBP14.28□□□□□ -0.12
TRIM56-204ENST00000487252 ATOH1Q92858 354 aaPredicted RBP14.28□□□□□ -0.12
TRIM56-204ENST00000487252 LINC01553A4QN01 128 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 WDR46O15213 610 aaKnown RBP14.27□□□□□ -0.13
TRIM56-204ENST00000487252 ANP32CO43423 234 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 IQCF3P0C7M6 154 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 SUPT20HL2P0C7V6 817 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 CYP2C9P11712 490 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 PLCD1P51178 756 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 DYNLL1P63167 89 aaKnown RBP14.27□□□□□ -0.13
TRIM56-204ENST00000487252 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.13
TRIM56-204ENST00000487252 TTC6Q86TZ1 520 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 WDR63Q8IWG1 891 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 MRPL38Q96DV4 380 aaKnown RBP14.27□□□□□ -0.13
TRIM56-204ENST00000487252 POP1Q99575 1024 aaKnown RBP14.27□□□□□ -0.13
TRIM56-204ENST00000487252 VCPKMTQ9H867 229 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 TRMT13Q9NUP7 481 aaKnown RBP14.27□□□□□ -0.13
TRIM56-204ENST00000487252 TRPC6Q9Y210 931 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 TMX2Q9Y320 296 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 CHD6Q8TD26 2715 aa14.27□□□□□ -0.13
TRIM56-204ENST00000487252 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-204ENST00000487252 MED19A0JLT2 244 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-204ENST00000487252 LTBRP36941 435 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 WDR5P61964 334 aaKnown RBP14.26□□□□□ -0.13
TRIM56-204ENST00000487252 PSMC6P62333 389 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 TFCP2Q12800 502 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
TRIM56-204ENST00000487252 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms